Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00546 ATGGGAGGTTTAGCTAGGATGACACATCTCATGAGCCTGCTGCTGGTAATGGGATTGTGCACCTTTGTTGTTGAAGGCACAAAACATGTAAGCATCAAGAACAAACTAGGATCTGGGAAGAACCTGACTTTACATTGCCAATCCAAAGACAATGATTTGGGCGAGCAGAACATAGCAGATGGAGATCAATTTGGCTGGGACTTCAATGACAACATTATTGAAACCACGCTGTTTTTCTGTGATCTGTCATGGGAGAAAGCTCAGGGGTATCATTTTGATGCGTATTCCTCTGGCAGGGACTTTATACGATGTCACACTGGATGTTCGTGGCTAGTATCCGTTGAAGGCATTTACATCTTGAATGGACAAACAGGGTTGTGGGAATTCATATACAATTGGCAAACTGAGTGA 411 0.4331 MGGLARMTHLMSLLLVMGLCTFVVEGTKHVSIKNKLGSGKNLTLHCQSKDNDLGEQNIADGDQFGWDFNDNIIETTLFFCDLSWEKAQGYHFDAYSSGRDFIRCHTGCSWLVSVEGIYILNGQTGLWEFIYNWQTE. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00546 136 PANTHER - 24 123 IPR010264 -
Seca11g00546 136 Pfam Plant self-incompatibility protein S1 29 133 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00546 Seca-Chr11 5350497 5350907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00546 30 136 Carbohydrate Esterase AT3G16970 31.818 1.68e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00546 - - gmx:102670225 210.69