Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00541 ATGTGCCAAACAAGCAGCAGTTCTGGGGGTATGAAGCTGCTATGGGTGTTTGGGTTTATGGGCTTGGTGGTTGTGAAATGGGTGGAAGGCTTCCAGAATGCTAGTGTGACAAACATGCAATATGTCCAAGGAGGAGGTTTCTACAACAGACCTTTGCTGGTTGGTCTTACTCTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCGGGTTACCACTTCCACCGTGGATATGGTTCAGGATCCAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATAAGAAATTGTATTTACAGTAAGAAAACACGTCATGGCTCATCAATATATATGGAAAAACAAATTCCATTTATTGGGATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAAATTCGCTATTGTGATGGTGCATCATTTAGTGGGGACAGTCAAAATGAGGCAGCAAAGTTGTATTTCAGAGGGCAGCGCATCTGGCAAGCTGCTATGGAAGACTTAATGTCAAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCATCTATACTGCATTGTGATGAATTTCGTGAATTGTTTCCTAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTATTCCTTGATGCTGTTGATGTATCTGGCCGTCGCAGTTTAAGGAATTTGTTTAGGAGTGTGGTCACCTTACAGGGAGTGCAAAGGAGCCTTCCAAGGAGTTGTACCAGTCACCTCAATCCAATTTTGTGCTTTTTCCCTCAGCACCTAATTGCCAGTGTGAGGACACCGCTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTCGCGCCACCATCTGCTGACTATCATTGGAATTGGATCGAGTGCAGAAAAAACTACGCACGTTGCAGTGCACCACAGATACAATATTTGCAAGGTTTTCGCAATCAGATGCTTAGAGTTACAAGAGGCTTCTCAAGATCTCGTCAAAACGGGCTATTCATAAACTCATGTTTTGCTCATTGCCAATCTGAGAGACAGGATACATGGTTTGCTCGTGATTCTCCTCATATTGGAAATAAAGTACGTCCATTCTAA 1161 0.4332 MCQTSSSSGGMKLLWVFGFMGLVVVKWVEGFQNASVTNMQYVQGGGFYNRPLLVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIRNCIYSKKTRHGSSIYMEKQIPFIGILSNKAEENPDFFNWNRVKIRYCDGASFSGDSQNEAAKLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLASILHCDEFRELFPRTTRVKCLSDAGLFLDAVDVSGRRSLRNLFRSVVTLQGVQRSLPRSCTSHLNPILCFFPQHLIASVRTPLFLLNAAYDTWQIQASLAPPSADYHWNWIECRKNYARCSAPQIQYLQGFRNQMLRVTRGFSRSRQNGLFINSCFAHCQSERQDTWFARDSPHIGNKVRPF. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00541 386 PANTHER NOTUM-RELATED 52 383 IPR004963 GO:0016787
Seca11g00541 386 Pfam Pectinacetylesterase 52 382 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00541 Seca-Chr11 5317012 5322893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00541 53 382 Carbohydrate Esterase AT1G57590 71.515 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00541 K19882 - gmx:100791571 712.99