Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00529 ATGTTTGGGATGAGAGTGAGGGTTGCACTAGCAGAGAAAGGGATCAAGTATGAGTACAAGGAGGAGGATCTGATGAACGCCAAGAGTGCATTGCTTCTCCAAATGAACCCCGTTCACAAGAAAATCCCAGTCCTTATCCATAATGGAAAGCCCATTTGTGAATCCCTCATTATTGTTGAGTATATTGATGAGGTCTGGAAGGATAAAGCTCCCCTGTTGCCCATTGATCCATACCAGAGAGCTCAAGCCAGGTTCTGGGCTGATTTTGTTGATAACAAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGGAAGGTAGATGAAGTTGAGACAGAAAAGAAGGAATTAATAGAGAATTTGAAGCAATTGGAGGAGTTTCTTGGGGACAAGCCATACTTTGGGGGTGGCACATTTGGGTTTCTTGATGTTGCTTTCATTCCTTTCTATAAATGGTTTTATGCTTATGAGACAGTTGGCAAATTGAAGTTAGACTGCCCAAAACTCATTGCATGGGGAAAGAGATGCTTGCAGAGAGAAAGTGTGTCCAAATTCCTTCCAGACGAAAAGGAGATATATGAGTTTGTTCTGAGCTTCAGGAAAGTGTCATTGACAATGGGGGATGAGGTGGTGTTGTTGGATTTCAGTCTCAGTATGTTTGGGATAAGAGTGAGGATTGCACTGGCAGAGAAAGGGATCAAGTATGAATACAGGGAGGAGGATCTGGTGAACACCAAGAGTGCATTGCTTCTGCAAATGAACCCTGTTCACAAGAAAATTCTTGTCCTTATCCATAATGGGAAGCCCATTTGTGAATCCCTCATTATTGTTGAGTATATTGATGAGGTCTGGAAGGATAAGGCTCCCCTGTTGCCAACTGATCCATACCAGAGAGCTCAAGCTAGGTTCTGGGCTGATTTTGTTGATAACAAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGGAAGGTAGATGAACTTGAGACAGAAAAGAAGGAATTAATAGAGAATTTGAAGCAATTGGAGGAGTTTCTTGGGGACAAGCCATACTTTGGGGGTGACACATTTGGGTTTCTTGATGTTGCTTTTATTCCTTTCTATAAATGGTTTTATGCTTATGAGACAGTTGGCAAATTGAAGTTAGACTGCCCAAAACTCATTGCATGGGGAAAGAGATGCATGCAGAGAGAAAGTGTGTCCAAATTCCTTTCGGACGAAAAGGAGATCTATGAGTTTATTCTGAGCTACAGGAAAAAAATTGGAGTGGACCAAGACACCAAAACGAACTAA 1287 0.4204 MFGMRVRVALAEKGIKYEYKEEDLMNAKSALLLQMNPVHKKIPVLIHNGKPICESLIIVEYIDEVWKDKAPLLPIDPYQRAQARFWADFVDNKVHEVAKKIWTGKVDEVETEKKELIENLKQLEEFLGDKPYFGGGTFGFLDVAFIPFYKWFYAYETVGKLKLDCPKLIAWGKRCLQRESVSKFLPDEKEIYEFVLSFRKVSLTMGDEVVLLDFSLSMFGIRVRIALAEKGIKYEYREEDLVNTKSALLLQMNPVHKKILVLIHNGKPICESLIIVEYIDEVWKDKAPLLPTDPYQRAQARFWADFVDNKVHEVAKKIWTGKVDELETEKKELIENLKQLEEFLGDKPYFGGDTFGFLDVAFIPFYKWFYAYETVGKLKLDCPKLIAWGKRCMQRESVSKFLSDEKEIYEFILSYRKKIGVDQDTKTN. 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00529 428 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 293 421 IPR010987 -
Seca11g00529 428 Gene3D Glutaredoxin 1 75 - -
Seca11g00529 428 Gene3D Glutaredoxin 206 292 - -
Seca11g00529 428 FunFam Tau class glutathione S-transferase 204 292 - -
Seca11g00529 428 CDD GST_C_Tau 294 415 IPR045074 GO:0004364|GO:0006749
Seca11g00529 428 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 70 IPR004045 -
Seca11g00529 428 CDD GST_C_Tau 77 198 IPR045074 GO:0004364|GO:0006749
Seca11g00529 428 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 214 410 IPR045073 -
Seca11g00529 428 SUPERFAMILY GST C-terminal domain-like 64 200 IPR036282 -
Seca11g00529 428 Pfam Glutathione S-transferase, N-terminal domain 211 281 IPR004045 -
Seca11g00529 428 Pfam Glutathione S-transferase, N-terminal domain 2 64 IPR004045 -
Seca11g00529 428 Coils Coil 316 343 - -
Seca11g00529 428 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 76 198 IPR010987 -
Seca11g00529 428 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 207 287 IPR004045 -
Seca11g00529 428 Gene3D - 293 422 - -
Seca11g00529 428 Gene3D - 76 205 - -
Seca11g00529 428 Pfam Glutathione S-transferase, C-terminal domain 112 171 - -
Seca11g00529 428 Pfam Glutathione S-transferase, C-terminal domain 330 388 - -
Seca11g00529 428 SFLD Main (cytGST) 206 423 - -
Seca11g00529 428 SFLD Main (cytGST) 1 204 - -
Seca11g00529 428 FunFam Glutathione S-transferase U20 293 422 - -
Seca11g00529 428 Coils Coil 99 126 - -
Seca11g00529 428 FunFam Glutathione S-transferase U20 76 204 - -
Seca11g00529 428 CDD GST_N_Tau 209 283 - -
Seca11g00529 428 FunFam Tau class glutathione S-transferase 1 75 - -
Seca11g00529 428 SUPERFAMILY GST C-terminal domain-like 281 419 IPR036282 -
Seca11g00529 428 SUPERFAMILY Thioredoxin-like 2 94 IPR036249 -
Seca11g00529 428 CDD GST_N_Tau 1 66 - -
Seca11g00529 428 SUPERFAMILY Thioredoxin-like 209 311 IPR036249 -
Seca11g00529 428 SFLD Main.3: Omega- and Tau-like 1 204 IPR045073 -
Seca11g00529 428 SFLD Main.3: Omega- and Tau-like 206 423 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00529 Seca-Chr11 5202376 5207862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00529 205 422 Glutathione S-transferase Gene Family AT1G17180 62.727 1.13e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00529 K00799 - cave:132171408 571.622