Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00514 ATGGTGATAATAAACCTTGGGAAGAAGAAGAACCAGAGGGAGGGAACACGACTTGGGAAATACGAATTGGGTAGGACTCTTGGTGAAGGTAATTTTGGCAAAGTCAAGTTCGCCAGGAACACTGATTCTGGTCAATCTTTTGCCATTAAGATCATTGAGAAGAACAAAATCATCGATCTCAATATCACTAACCAGATAAAGAGGGAAATATCTGCCTTAAAGCTCCTCAGGCATCCCAATGTTGTTAAATTATACGAGGTCTTGGCTAGCAAAACAAAAATCTATATGGTACTTGAGTACGTGACTGGGGAGGAGTTATTTGATAAAATTGCATCCAAGGGTAAATTTACTGAAAGTGAAGGTAGAAAGCTGTTTCAACAATTGATTGATGGTGTGAGCTATTGCCATAGTAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTGCTTGTGGATACCAAAGGGAATATAAAGATAACTGATTTTGGCCTTAGTGCTTTACCTCAGCAATTTGGGGGAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCAGAGATTCTTGCTAATAGGGGCTATCACGGTGCAACATCAGATGTATGGTCATGTGGTGTTGTCTTATTTGTAATCTTAACAGGATACCTACCTTTTGATGATAGAAATCTTGCAGTTCTCTATCAAAAGATTTTAAAAGGAGATGCTCAGATACCAAAATGGTTATCACCTGGTGCACAAAACATTATAAAGAGGATTCTTGATCCCAATCCTAAAACCAGGACAACAATGGCTGGGATCAAAGAAGATCCATGGTTTAAGCAGGGTTATACTCCAGCAGATCCAGAGGATGAGGAAGAGGACATATTTATAGATGATGAAGCCTTTTCCATCAATGAATTGGTATACCCACATGAAGCAGACTCAGGATCACCAATCCGTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGGTTTACATCAAATCTTTCAGCCAAAGATCTGATAGAGAAGATTGAGGACGCTGCAAAAGAAATGGAATTTAGAGTCCAGAAGAAAAATGGCAAATTGAAAGTGATGCAAGACAACAAGGCGCATAAAACTCTAGGCAGCCTCTCAGTGACAGTAGAGGTGTTTGAAATAAGCCCATCGTGGTATGTAGTGGAATTAAGGAAGTCTTATGGAGATGCCTCTGTATATAGACAGTTATGCAAGAAGTTGTTGAATGATTTGGGTGCTCCACCAAGGCATGCGCCAGTGAGCTCAGAAGTGAACTAG 1344 0.4048 MVIINLGKKKNQREGTRLGKYELGRTLGEGNFGKVKFARNTDSGQSFAIKIIEKNKIIDLNITNQIKREISALKLLRHPNVVKLYEVLASKTKIYMVLEYVTGEELFDKIASKGKFTESEGRKLFQQLIDGVSYCHSKGVFHRDLKLENVLVDTKGNIKITDFGLSALPQQFGGDGLLHTTCGSPNYVAPEILANRGYHGATSDVWSCGVVLFVILTGYLPFDDRNLAVLYQKILKGDAQIPKWLSPGAQNIIKRILDPNPKTRTTMAGIKEDPWFKQGYTPADPEDEEEDIFIDDEAFSINELVYPHEADSGSPIRINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKDLIEKIEDAAKEMEFRVQKKNGKLKVMQDNKAHKTLGSLSVTVEVFEISPSWYVVELRKSYGDASVYRQLCKKLLNDLGAPPRHAPVSSEVN. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00514 447 Gene3D Transferase(Phosphotransferase) domain 1 11 316 - -
Seca11g00514 447 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00514 447 CDD CIPK_C 319 430 - -
Seca11g00514 447 FunFam Non-specific serine/threonine protein kinase 315 436 - -
Seca11g00514 447 Coils Coil 358 378 - -
Seca11g00514 447 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Seca11g00514 447 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Seca11g00514 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Seca11g00514 447 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00514 447 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Seca11g00514 447 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 418 - -
Seca11g00514 447 Pfam NAF domain 317 374 IPR004041 GO:0007165
Seca11g00514 447 SUPERFAMILY Protein kinase-like (PK-like) 18 305 IPR011009 -
Seca11g00514 447 FunFam Non-specific serine/threonine protein kinase 14 314 - -
Seca11g00514 447 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00514 447 Gene3D Kinase associated domain 1, KA1 317 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00514 Seca-Chr11 5024250 5029026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00514 84 435 CBL-interacting serine-threonine protein kinases AT3G17510 70.538 1.02e-174 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Seca11g00514 Pkinase 4.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00514 K07198 - gmx:100777468 719.153