Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00501 ATGGGTGTGGTTGTGCTACTTGCTGCAGTTCTTATGGCAGCAGCAACTCAAACTGAAACACAATCTTTGCCAATTCACCCAAAGCCAGAGTGCCCAACAATAACAAAGTGTGGGTCCGTCAACATTCCGTTCCCATTTGGCACAACCGAGGATTGTTCCCTAGACACTTCTTTCATCATCGGTTGCAACAAAACCTCTTCACCACACACACCTTTCTTGCCTGCAAACAATCTAACTGTGCTAAACATCTCACTCAACGACGGCGAACTACGCGTTGCGTGGCCAGTAGCCAGCGATTGCTACGGTAATAATGGCACACAGGTGAGTGAAACACCTCAGTTATTTAACCTGACGACGCCTCCTAATCCTAATCCTACTTTTCACTTATCGTCAACTCGAAACAAGTTGATAGTGGTTGGTTGTGACACCTTTGGACTAGTGATTGGATATGATGGTACAGAGGAAAAGAACTACACCACTGGATGCGTGTCTCTGTGCAATAGGCTTGATGACATCGTAGCCAATGGATCCTGCTCTGGTGTTGGTTGTTGCCAGACTTCAATACCCCAAAGACTATCCACTATGTTTTATGGTTCTAGCTCCTTATTAAACAACCACACAAATGTGATTGCCTTCAATCCATGCGGTTACACTTTTCTGGCTGAAGATGGAGCCTACAATTTCACCTCCACAGACCTTAAAAGGTTTGAGACGACGGCATTTCCTGTGGTGGTGGATTGGGCGGTGGGGAACCAAACATGCCGAGAAGCTAAGAAGGAGGAATCGAGTTATGCGTGTAAAGCTGACAACAGTGAGTGTCACGATTCCCCTGAGGGAAAGGGAACTGGTTATCTTTGCAATTGCTCTGCTGGTTTTCAGGGGAACCCTTACCTCCTCAATGGCTGCCAAGATGTTGATGAATGCATGAAATCCAACAACTGCATTCCTGGAGCGATATGCAGCAACTTCCCTGGGGGCTACAATTGTTCATGCCCACAAGGATATGACGAAGGATATGAAGGAGACGACAAAAGATGCATTCCCATATCTAATACCAATTCCAACAGAGAGATCATTCTCATAATTGCTTTGAGTGTGAGTGTAAGCATCATAGCAATACTCATAGCAAGCTTTTATGTGTATCGCACAATGAAGAAAAGAAAGCTCATCAAACTTAAACAACAATTTTTTCAACAAAATGGTGGCCTATTGTTACAACAACAGATAGCCAAGCATAGAGGGTCAGCTGAAATGGCTAAAGTCTTCACTATAGAGGAGCTAAAGGAGGCTACCAATAACTTTGATGAAGGCAGGGTACTAGGCCAAGGTGGACAGGGAACAGTTTACAAAGGACTACTAGTAGATAACAGGATTGTAGCAATAAAAAAATCCAGAATCGGTGACCCAAAACAGATCGAGCAGTTCATCAATGAGGTGATCTTGCTTTCCCAAATCAACCATAGGAATGTGGTGAAGCTCTTAGGTTGTTGTTTAGAGACAGAATTTCCCTTGCTTGTTTATGAATTCATTCCCAATGGTACTATTTATGAGCACATTCACAATCATCAAAGCCATTCTTTAAGACTTACATGGAAAACAAGGTTAAGAATAGCAACAGAAACTGCTGGAGCCTTGGCATACTTGCATTCTGCTACTTCTACACCAATCATACATAGAGATGTGAAAACTACAAATATACTACTTGATAGTAGTCTCACTGCAAAAGTTTCTGATTTTGGAGCTTCTAGAATTATTCCTCTTGATCAAAGTCAATTAACCACTTTGGTGCAAGGGACACTTGGGTATCTTGACCCAGAATACTTCCACACAAGCCAGTTAACAGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTCCTAGCAGAGCTACTGACAGGAAAAAAGGCACTTTCTTTTGATAGACCTGAGGTTGCTAGAAACCTTGCAGTGCATTTTGTTTCTTCAATGAAAGAGGGTCGATTACTTGACATTGTCGACAAGGACATAATAGATGAGGCAACTGTTGAGCAACTGGTGGTAGTTGCCAATATTGCAAAGATGTGTTTAAGGGTGAATGGAGAGGAAAGACCCACCATGAAAGAAGTGGCAATGGAACTTGAGGGAATGATAGGTACGGAAAAGCATCGATGGGAAAGTGTCAACTTGTCTTCAGAAGAGGCTGAAAACTTGCTTAAAACAACAGTACCAGCTATTTTCAATGTTGAAGATGGTGCTGTTAGTGGAAGTGGCATTAGTTCTTCTGGCTTTGATAGCTTAAATCATATTTCCATGTCATTGGGTGGTGGAAGGTGA 2310 0.4268 MGVVVLLAAVLMAAATQTETQSLPIHPKPECPTITKCGSVNIPFPFGTTEDCSLDTSFIIGCNKTSSPHTPFLPANNLTVLNISLNDGELRVAWPVASDCYGNNGTQVSETPQLFNLTTPPNPNPTFHLSSTRNKLIVVGCDTFGLVIGYDGTEEKNYTTGCVSLCNRLDDIVANGSCSGVGCCQTSIPQRLSTMFYGSSSLLNNHTNVIAFNPCGYTFLAEDGAYNFTSTDLKRFETTAFPVVVDWAVGNQTCREAKKEESSYACKADNSECHDSPEGKGTGYLCNCSAGFQGNPYLLNGCQDVDECMKSNNCIPGAICSNFPGGYNCSCPQGYDEGYEGDDKRCIPISNTNSNREIILIIALSVSVSIIAILIASFYVYRTMKKRKLIKLKQQFFQQNGGLLLQQQIAKHRGSAEMAKVFTIEELKEATNNFDEGRVLGQGGQGTVYKGLLVDNRIVAIKKSRIGDPKQIEQFINEVILLSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTIYEHIHNHQSHSLRLTWKTRLRIATETAGALAYLHSATSTPIIHRDVKTTNILLDSSLTAKVSDFGASRIIPLDQSQLTTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALSFDRPEVARNLAVHFVSSMKEGRLLDIVDKDIIDEATVEQLVVVANIAKMCLRVNGEERPTMKEVAMELEGMIGTEKHRWESVNLSSEEAENLLKTTVPAIFNVEDGAVSGSGISSSGFDSLNHISMSLGGGR. 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00501 769 ProSiteProfiles Protein kinase domain profile. 434 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00501 769 FunFam Fibrillin 2 299 347 - -
Seca11g00501 769 ProSiteProfiles EGF-like domain profile. 304 347 IPR000742 -
Seca11g00501 769 SMART egf_5 253 303 IPR000742 -
Seca11g00501 769 SMART egf_5 307 347 IPR000742 -
Seca11g00501 769 SMART serkin_6 434 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00501 769 CDD EGF_CA 304 335 - -
Seca11g00501 769 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 320 331 IPR000152 -
Seca11g00501 769 CDD STKc_IRAK 440 708 - -
Seca11g00501 769 Gene3D Transferase(Phosphotransferase) domain 1 510 729 - -
Seca11g00501 769 SMART egfca_6 304 347 IPR001881 GO:0005509
Seca11g00501 769 Pfam Protein tyrosine and serine/threonine kinase 437 705 IPR001245 GO:0004672|GO:0006468
Seca11g00501 769 Gene3D Laminin 264 340 - -
Seca11g00501 769 Gene3D Phosphorylase Kinase; domain 1 405 509 - -
Seca11g00501 769 SUPERFAMILY Protein kinase-like (PK-like) 418 705 IPR011009 -
Seca11g00501 769 Pfam Calcium-binding EGF domain 304 346 IPR001881 GO:0005509
Seca11g00501 769 FunFam Wall-associated receptor kinase 2 404 509 - -
Seca11g00501 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 556 568 IPR008271 GO:0004672|GO:0006468
Seca11g00501 769 SUPERFAMILY EGF/Laminin 302 351 - -
Seca11g00501 769 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 709 IPR045274 GO:0007166
Seca11g00501 769 Pfam Wall-associated receptor kinase galacturonan-binding 31 93 IPR025287 GO:0030247
Seca11g00501 769 FunFam Wall-associated receptor kinase 2 510 728 - -
Seca11g00501 769 ProSitePatterns Calcium-binding EGF-like domain signature. 304 329 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00501 Seca-Chr11 4936795 4940443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00501 5 762 Receptor kinase-like Gene Family AT1G21230 46.373 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca11g00501 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00501 - - gmx:100798027 986.097