Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00457 ATGAAGACCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTAAATCTCAACCCTCCAACAAGCCTCTCCTTCTCTGGCTCAATGGAGGAAGGACCCGGATGCTCCTCTATTGGGTATGGTGCAGTTGTTGAGATAGGACCTCTTTTAGTCAACAAAAATGGTGAAGGACTATCTTTCAACACATACTCTTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTTTCTTACACAAACACATCTTCTGATCTCACCATATTAGAGGATCATTTTGTGGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTACAAAGATTCCCTCAGTTCAAATCCCGGGACTTTTATATATCAGGAGAAAGCTATGCTGGACACTATATCCCTCAGCTTGCAGAGTTAGTCTTTGACAGGAACAAAGATAGTAACAAATACCCCTTTATTAATCTTAAAGGTTTTATAGTAGGGAATCCAGAAACTGAAGATTACTATGACTATAAAGGCCTTTTGGAATATGCATGGAGCCATGCAGTAATATCAGACCAGCAATATGACAAAGCAAAACAAGTTTGTGACTTTAAACAAATGGAATGGTCTAATGAATGCAATCAGGCCATGAATGAAGTCTTTCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCTTCATGTCATCTAAATAGCACATCATCAGTAGCTCTTGATAGTGAGAGTAATGGCCCTGAATCACTCACAAAGGTGAGAAATGATTATAGAATAAGGAGGATGAGAATTTTTGGAGGCTATGACCCATGTTATTCCACATACGCACAACAATATTTCAATAAGATAGATGTTCAATCATCTTTTCATGTAAATACTAAAAGAGGAAACAACACTAATCTAACATGGAAGGTTTGCAATGATTCCATATTGCGGACTTATAACTTCTCTGTTTTTTCGGTCCTACCCATTTACACCAAACTCATCAAGGGTGGACTTAAGATATGGGTTTACAGTGGAGATGCAGATGGCAGAGTACCAGTGATAGGGACACGATATTGCATTGATGCTCTTGGATTACCCCTCAAGTCTAGTTGGCGGACATGGTATCATCATAATCAGGTTGGAGGAAGGATAGTGGAATATGAAGGGCTAACATATGTGACAGTGAGAGGAGCTGGTCATTTGGTGCCTCTCAATAAACCCAGTGAAGCTCTTTCTCTAATTCATGCTTTCCTAACAGGCGACCATCTCCCAACTCGTCCATAA 1275 0.3992 MKTMGGPFSTGSLKLNLNPPTSLSFSGSMEEGPGCSSIGYGAVVEIGPLLVNKNGEGLSFNTYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDHFVAEDAYNFLVNWLQRFPQFKSRDFYISGESYAGHYIPQLAELVFDRNKDSNKYPFINLKGFIVGNPETEDYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKQMEWSNECNQAMNEVFQDYSEIDIYNIYAPSCHLNSTSSVALDSESNGPESLTKVRNDYRIRRMRIFGGYDPCYSTYAQQYFNKIDVQSSFHVNTKRGNNTNLTWKVCNDSILRTYNFSVFSVLPIYTKLIKGGLKIWVYSGDADGRVPVIGTRYCIDALGLPLKSSWRTWYHHNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHAFLTGDHLPTRP. 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00457 424 FunFam Carboxypeptidase 71 234 - -
Seca11g00457 424 ProSitePatterns Serine carboxypeptidases, histidine active site. 387 404 IPR033124 GO:0004185
Seca11g00457 424 Gene3D - 323 417 - -
Seca11g00457 424 FunFam Carboxypeptidase 323 417 - -
Seca11g00457 424 Gene3D alpha/beta hydrolase 15 234 IPR029058 -
Seca11g00457 424 ProSitePatterns Serine carboxypeptidases, serine active site. 124 131 IPR018202 GO:0004185
Seca11g00457 424 FunFam Carboxypeptidase 270 420 - -
Seca11g00457 424 Pfam Serine carboxypeptidase 32 416 IPR001563 GO:0004185|GO:0006508
Seca11g00457 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 61 73 IPR001563 GO:0004185|GO:0006508
Seca11g00457 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 135 IPR001563 GO:0004185|GO:0006508
Seca11g00457 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 74 84 IPR001563 GO:0004185|GO:0006508
Seca11g00457 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 387 400 IPR001563 GO:0004185|GO:0006508
Seca11g00457 424 SUPERFAMILY alpha/beta-Hydrolases 20 421 IPR029058 -
Seca11g00457 424 Gene3D - 273 312 - -
Seca11g00457 424 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 404 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00457 Seca-Chr11 4459218 4463342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00457 305 420 Calmodulin-binding Proteins AT2G22960 31.624 1.53e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00457 K16297 - gmx:100792930 738.799