Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00440 ATGGCATCATCATCATCATTATCACCATCACCATCGTCATCTCTGATCTCAAACGCGGTAACGAACACGGACCGGTCACGTGACTCAAAGAGGAGGAGGAAGAAGAAGGCGCAGCAGTTAAAGCATCAGCAACAAGAAGAACAAAGCAATCCGAAATGGAAATCCCAAACGCAGCAACAAATCTACTCCTCCAAGCTTCGTCAAGCCTTAACCAGAGTCAACCACGGCTCATCCACCTCCCGAGGCAAAGCCGTTCGTGAAGCCGCCGACAGAGCACTCGCCGTGACGGCTAAGGGGAGGAGTCGCTGGAGCCGAGCCATTCTAACGAACCGGCTCAAGCTCAATTTCAGGAAGCACAAGAGGCAGAGAGTTACCGCACCGTCGCCACCAAACAGGTCGAAGAAGCCACGTGTTAGCGTTTTCCGGTTGAAGGGGAAGGTTGTGCCTGGTGTGCAGACGAAAGTGAGGTTCCTTGGACGGTTGGTTCCCGGTTGCAGGAAAGAACCGTTACCGGTTATTCTGGAAGAAGCTATTGATTACATACCAGCGCTTGAGATGCAGGTCCGAGCCATGAGTGCTCTGTTTAACCTACTTTCTGCTTCTGCTTCTGGCGCTGGCTCAAGTTCCGAACCAGCGCCACCTAGCTCATAG 651 0.5269 MASSSSLSPSPSSSLISNAVTNTDRSRDSKRRRKKKAQQLKHQQQEEQSNPKWKSQTQQQIYSSKLRQALTRVNHGSSTSRGKAVREAADRALAVTAKGRSRWSRAILTNRLKLNFRKHKRQRVTAPSPPNRSKKPRVSVFRLKGKVVPGVQTKVRFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSASASGAGSSSEPAPPSS. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00440 216 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 54 198 IPR044660 GO:0006355
Seca11g00440 216 Coils Coil 27 47 - -
Seca11g00440 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 201 IPR036638 GO:0046983
Seca11g00440 216 MobiDBLite consensus disorder prediction 1 61 - -
Seca11g00440 216 MobiDBLite consensus disorder prediction 43 61 - -
Seca11g00440 216 MobiDBLite consensus disorder prediction 1 23 - -
Seca11g00440 216 CDD bHLH_AtIBH1_like 142 194 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00440 Seca-Chr11 4297022 4297672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00440 49 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 52.761 2.97e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00440 - - gmx:100803765 270.396