Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00431 ATGGGGGCAGTGACTTCACCTCAACGACTCTGCATTGTGACCGAGTTTCTCCCACGTGGAAGCTTGTGTCACTTGTTACACAGAAACACACCCAAACTTGACTGGAGACGGCGAGTTCATATGGCCTTGGATATTGTTGGTGATTTTGGTCTTTCACGTCTTAAGCATGAAACATATCTCACAACTAAGACAGGGAGGGGCACGCCTCAATGGATGGCACGAGAAGTTCTTCGTAATGAACCATCAGATGAGAAGTCTGATGTATACAGCTTTGGGGTGATATTATGGGAACTTGCAACTGAAAAGATCCCTTGGGATAATCTCAACTCAGTGCAGGTGATTGGAGCTGTAGGGTTCATGAATCAGCGGCTAGAAATTCCAAAAGATGTTGATCCACGGTGGGCTTCAATAATTGAGAGCTGCTGGCATAGTTTGTCCATTCCTACCATCCAACTCTCAGACCAACATTCCGGGAACTGCTTGAAAGGCTTAGAGAGCTGTAAAAACGGTATGCCATTCAGTTCCAGGCAGCCCGATCTGCTGGCGGGGAAAGCACCCAAAAGGAGTCCTAGACACAACCTTGGAGCTATTCTTTCTTTTTGTCACACGTGGCTGATGCATAAGGATATTTTCTGCATATATTTTATCAAAGTTCTTGGAGTAGATGAAATGGTACAAACAGCTGGTCTTGGAGCCATGTAG 702 0.4573 MGAVTSPQRLCIVTEFLPRGSLCHLLHRNTPKLDWRRRVHMALDIVGDFGLSRLKHETYLTTKTGRGTPQWMAREVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSVQVIGAVGFMNQRLEIPKDVDPRWASIIESCWHSLSIPTIQLSDQHSGNCLKGLESCKNGMPFSSRQPDLLAGKAPKRSPRHNLGAILSFCHTWLMHKDIFCIYFIKVLGVDEMVQTAGLGAM. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00431 233 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00431 233 Gene3D Transferase(Phosphotransferase) domain 1 47 146 - -
Seca11g00431 233 SUPERFAMILY Protein kinase-like (PK-like) 2 143 IPR011009 -
Seca11g00431 233 Pfam Protein tyrosine and serine/threonine kinase 46 144 IPR001245 GO:0004672|GO:0006468
Seca11g00431 233 Gene3D Transferase(Phosphotransferase) domain 1 1 46 - -
Seca11g00431 233 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00431 Seca-Chr11 4153909 4156382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00431 1 144 MAP Kinase Kinase Kinase AT5G49470 68.927 3.51e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Seca11g00431 PK_Tyr_Ser-Thr 8.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00431 - - gmx:100785569 275.018