Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g00391 | ATGGTGGATCTGAGTGGAAAAGGATCAGAGGGTGAAGATGCAAACCCTAACTCTGCTTCGTCAGGGAACAGTCCAACCACCAATGAACAGAAGAAAACCTGCGCCGATTGCGGAACCACCAAAACCCCTCTCTGGAGGGGTGGTCCTGCAGGACCTAAGTCACTTTGCAACGCTTGCGGGATCAGAAGCAGGAAGAAGAAGAGAGCGATTTTGGGGATAAGCAAAGGGAACAACGAGGATGGACACAGGAAGGGGAAAAGGAGTAGTAGCAGCAAAGTTGGAGATAGTTTGAGCTTGAAACAGAGACTATTGGCTTTGGGAAGAGAAGTTTCGATGCATCGATCGCATTGGAAGAAATTAGGGGAAGAAGAGCAAGCGGCGGTGTTGTTGATGTCACTATCTTATGGATCCGTTTATGCTTAA | 423 | 0.4823 | MVDLSGKGSEGEDANPNSASSGNSPTTNEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGISKGNNEDGHRKGKRSSSSKVGDSLSLKQRLLALGREVSMHRSHWKKLGEEEQAAVLLMSLSYGSVYA. | 141 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g00391 | 140 | SMART | GATA_3 | 28 | 92 | IPR000679 | GO:0006355|GO:0043565 | |
Seca11g00391 | 140 | Pfam | GATA zinc finger | 34 | 68 | IPR000679 | GO:0006355|GO:0043565 | |
Seca11g00391 | 140 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 28 | 68 | - | - | |
Seca11g00391 | 140 | MobiDBLite | consensus disorder prediction | 70 | 98 | - | - | |
Seca11g00391 | 140 | MobiDBLite | consensus disorder prediction | 11 | 37 | - | - | |
Seca11g00391 | 140 | PANTHER | OS01G0976800 PROTEIN | 14 | 140 | - | - | |
Seca11g00391 | 140 | ProSitePatterns | GATA-type zinc finger domain. | 34 | 59 | IPR000679 | GO:0006355|GO:0043565 | |
Seca11g00391 | 140 | Gene3D | - | 28 | 94 | IPR013088 | GO:0006355|GO:0008270 | |
Seca11g00391 | 140 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Seca11g00391 | 140 | ProSiteProfiles | GATA-type zinc finger domain profile. | 28 | 64 | IPR000679 | GO:0006355|GO:0043565 | |
Seca11g00391 | 140 | CDD | ZnF_GATA | 33 | 87 | IPR000679 | GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g00391 | Seca-Chr11 | 3820008 | 3821069 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g00391 | 23 | 140 | C2C2-Gata Transcription Factor Family | AT3G06740 | 60.484 | 1.09e-41 | 134 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-GATA | Seca11g00391 | GATA | 6.1e-17 | CL0167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g00391 | - | - | aprc:113847917 | 229.18 |