Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00389 ATGATAGTCTCGTTCTCGCACCACTGTTGCTTCGGCATCGCCGTCTTAGCCATCTTCCTCGCAACGACGTCGTTTACGGATGCACAATCCTGCAACGGTATACTCCTCTCGTACGCTTACACCGGCGGAACGCGGTTGCCGCCGAACGTCACCGACCCGAAGCAGCAACCATACCGGTTCGAGTCGACTCTGAGCGTCCTCAACAACGGTCTCGACGAGCTCAAGTCTTGGAAGGTCTTCGTCGGGTTTCAGAACGATGAGTACTTGGTCTCTGCCTCCAATGCGGTCCTCGCCGACGGCACTACTCTCCCTGCCGCCGTCGGAAACGGCACCGTCTTCGCCGGCTATCCTATGACCGATCTCAAAACCGCCGTGGAGACTGCCGGCGACTTGACTCAGATGCAGGTTCAGATCGAGCTCGTCGGCACTGTTTTCGGTGTGGCGCCGCCAAGTGTTCCCTTGCCTTCCTCCATCAACCTCGCTAATGATGGATTCGTCTGTCGGAAATCTACTGCTCAAGGGAAGAATGCGACTAATGTGTGTTGTACAAGAGATCCCAAGTTCAAAACAAACATCACCACGGATGAAGAGTTTTTGCCTCGTCAAAATGGTGATCTTACCATTATGTATGATGTGATCAGAACTTATGATTCCAATTACTGGGCAGAGGTTACGATTGCAAATCATAATCCTCTTGGTCGTCTTGACAACTGGAGGTTGAGCTGGGATTGGATGAATGATGAGTTTATATTTTCAATGAAAGGGGCTTATCCATCTGTTGTGGATGCTTCTGAGTGTATCTTTGGTAAGCAAGGTACATTCTATAGGGACCTTGACTTTGCCAATGTGTTGAATTGTGAAAGAAGGCCTACCATAATTGATCTCCCTCCCACTAAGTTCAATGATACAGACCTTGGGAAAATCCCTTCTTGCTGCAGGAATGGTACCATATTGCCACCATCCATGGACCCTAGCAAGTCCATGTCAAGATTCCAGATGCAGGTCTTCAAAATGCCGCCGGCACTTAACCGCTCCCAGCTTTCGCCACCACAGAACTGGAAGATCAGTGGTACACTCAACCCTGACTACAAATGTGGCCCTCCTGTTCGTGTGAGTCCTACTGAGAATCCAGATCCATCAGGCTTGCCATCTAACAAAACTGTAATGGCCAGTTGGCAGGTTGTGTGCAATATAACAACTGCCAAGGGAACAGCAAGAAAATGCTGTGTCTCATTTTCAGCCTATTACAATGATTCTGTTATTCCATGCAAAACATGTGCATGTGGATGCCCCAGGAACACAGAAAGAACATGTAGTACTGGTGCACCAGCTATGTGGCTTCCACCTGAGGCACTGCTTGTTCCTTTTGAGAACAGAACTGCCAAAGCTGTTGCTTGGGCTAGTTTGAAACATCTACCAGTGCCAAAACCGATTCCCTGTAGTGATAACTGTGGTGTGAGCATCAACTGGCATTTATTTACAGACTATAATAAAGGATGGAGTGCAAGGGTCACACTTTTTAATTGGGGTGACACTAGTTTTGCTGACTGGTTTGCTGCGATACAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAAGCGCCCTAGATATAGATGGTGTGAATAATACAATTATTATGCAAGGTTTGCCGGGATTGAACTACCTTGTGGCAGAAACAGATGGAGCTGACCCTCTGAGAGATCCTAGGGTGCCTGGTAAGCAACAGTCAGTAATCTCATTCACAAAGAAAACTACTCCTGGAATCAATGTAGCTGGTGGAGATGGGTTTCCCACTAAAGTCTTTTTCAATGGGGAGGAATGCTCTCTTCCTACAATATATCCAAGCAGTGGTTTCAGGAAGGATTTTTCCTGGACAACTTCGATGCTCTTAACACTGTTGCTGATTGTCTTGATGCGGTAA 1938 0.4737 MIVSFSHHCCFGIAVLAIFLATTSFTDAQSCNGILLSYAYTGGTRLPPNVTDPKQQPYRFESTLSVLNNGLDELKSWKVFVGFQNDEYLVSASNAVLADGTTLPAAVGNGTVFAGYPMTDLKTAVETAGDLTQMQVQIELVGTVFGVAPPSVPLPSSINLANDGFVCRKSTAQGKNATNVCCTRDPKFKTNITTDEEFLPRQNGDLTIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWRLSWDWMNDEFIFSMKGAYPSVVDASECIFGKQGTFYRDLDFANVLNCERRPTIIDLPPTKFNDTDLGKIPSCCRNGTILPPSMDPSKSMSRFQMQVFKMPPALNRSQLSPPQNWKISGTLNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKGTARKCCVSFSAYYNDSVIPCKTCACGCPRNTERTCSTGAPAMWLPPEALLVPFENRTAKAVAWASLKHLPVPKPIPCSDNCGVSINWHLFTDYNKGWSARVTLFNWGDTSFADWFAAIQMDKAAAGFEKMYSFNASALDIDGVNNTIIMQGLPGLNYLVAETDGADPLRDPRVPGKQQSVISFTKKTTPGINVAGGDGFPTKVFFNGEECSLPTIYPSSGFRKDFSWTTSMLLTLLLIVLMR. 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00389 645 PANTHER COBRA-LIKE PROTEIN 7 26 642 - -
Seca11g00389 645 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00389 Seca-Chr11 3802433 3805294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00389 31 629 COBRA Gene Family AT4G16120 68.937 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00389 - - gmx:100803929 1187.56