Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00383 ATGGAAAATAATAATGAAAATGTTGATGAGAATGTCGTTGGGTTGGAAGATATTGTAAGTGAAGATGAAGTTGACACTGCAAGTGATTATGATCCTGATCAATTTGTCTTCGCTGTGGATTCGGAGGCTGATTTTGTGAAATTAAACCAAGAAATGTTATGTGTGGAAAATGTTAGTAAATTTAATTTTCCAAATTTGGAGGTTGCTTATGACTTTTATAATTGGTATGGGAAGAAGACTGGATTTTCTGCACGGAAGAGCAAAGTCCGTAAGAATGCAATGGGTGAAATTTATGAGAAGACATACCTTTGCCACAGGGAAGGAAAGCGACCAAATAACATGAAACCAGAAAAGGGGAAGAAAAAACGTCCAGCCAAGCCGGAGACAAGGTGTTCTTGCCCTGCAAAAATGAAGGTTCGGCTCGATGGACCATCTGGCCGTTGGAACGTGTCTAAGTTCTGTGATGCGCATAACCATGATATGCTACCCCCCAAATATGAAGGGATGCTGCCTGCTCATAGGAAAATGAGTGTAGCTGACATCTTGGAGATGAATAACATGCGAGATGCCGGTATTAGTACACCACAGATTTATGGGTCATTTGCTAGTCAATCTGGAGGTTACAATAATGTTGGCTTTCGTAAAAGAGATCTTTACAATGAGATTGGTAGGCAAAGAATGTTGCAGTTGAGTGATATAAAGGGTGCTATTAAGTATTTACGTGAAAGGGAGGTCAATGAAGGGTCTATGTTTTGGAGGTACACGACTGATTGTGAAGGTAGGCTACAACGTTTGTTTTGGTGTGACAGTCATTGCCAAGTTGATTACAAGTTATTTGGTGATGTTCTGGCCTTTGATGCCACATACCGGAAGAACAAGTATCATTTTCCTTTAGTGGTTTTTTCGGGCATTAATCACCATAATCAAAGTACAATATTTGCTTGTTCCCTAGTTGTTGATGAAACTGAGGGTACTTATGTGTGGGTTTTGGAACAGCTGATGGTGGCAATGAAAGACAAGATGCCTTCAGCAGTGATAACAGATGGTGACCTTGCTATGCGGAATGCCATCAAAAGAGTTTTACCCAATGCTCACCATAGGCTTTGTGCATGGCACCTGTGTCGTAATGCAGCCAGTAATGTTAAGAATCCTGAGATGGTTTCCATGTTTAGGAAATGTATGTTGGGTGATTATGAGGTTTCCGAGTTTAAACATAGGTGGGAGGTAATGGTGAAGGAATTTAGACTGGAGGATAACAATTGGGTGAAGGAAATGTATGACAAGAAGAGGATGTGGGCTACAGCTTATATAAGGGGGAAATTCTTTGCAGGGTTTAGGACAACTTCTCGATGTGAGGGGTTGCACGGGCAACTAGCCAAGTTTGTACACTCCCGTCATGATTTAGTGGCTTTCTTGAAAAATTTTGATCGTTTCCTTGAGGTACTAAGGTATAATGAGCTTGAAGCTGATTTTGAGTCAGTCTGTGGTGACATGATGTTGGAAACTAACCTGCATGCACTAGAGAGATCAGCGTCTAAGATTTTCACAAAGGAGGTTTTCATATTGGTGCGTCCCGCCATTGCTAGGGGAAGCATGATGAGGGTGATTGGTTGTACACAGCTGATGTCCCAAACCATTTTTACTGTCACGAAGTATGGAAGATCTCATAAGGAGTGGCAAGTGTCTTATATTGAACAACCATTGTTACTTAAATGTTCTTGTCAAAGAATGGAGTCCTTTGGACTGCCTTGTGACCACATAATAGGTGTCATGGTACACTTGAACATACAAGAGCTGCCAAATAGTCTTGTGTTAAGTAGATGGACCATGGGTGTGAAGGAAAATGCTATTGAAATAAGGGATGGACGTAATTCCATTTGGGATTCTGTCTTTGATGCACGTTGTGGTTATTTGGACTTTTTGTGTAAGAAGATGAATAGGTTGGGGGGTAGGTCTACTACAAGATTCAATGACATTAAGGATTGGGTTAGCAATAAAATAATTGTGTATAGTGAAGCAGATGTCTCTAGTGGTGAGGGTAATGAAAATCTTAGTGATGAAGTGGGATCTACATTGAAAGATCCAATTAGAGTTGGTTCCAAGGGCTGTGCTGCTGGTTCGTCTACTCAAGCAAGAAGACGACCTCATAAATGCAGGCAATGTGGTGTTGTTGGTCACAACAGAACAACATGCCCACACAAAAGGAAATTTGATGCCTTCGTTGAGTCAGGAGTTCATGAAGACGGTGTAAGTCACGTCTCCGCTGAAGGTGTTTAG 2277 0.4124 MENNNENVDENVVGLEDIVSEDEVDTASDYDPDQFVFAVDSEADFVKLNQEMLCVENVSKFNFPNLEVAYDFYNWYGKKTGFSARKSKVRKNAMGEIYEKTYLCHREGKRPNNMKPEKGKKKRPAKPETRCSCPAKMKVRLDGPSGRWNVSKFCDAHNHDMLPPKYEGMLPAHRKMSVADILEMNNMRDAGISTPQIYGSFASQSGGYNNVGFRKRDLYNEIGRQRMLQLSDIKGAIKYLREREVNEGSMFWRYTTDCEGRLQRLFWCDSHCQVDYKLFGDVLAFDATYRKNKYHFPLVVFSGINHHNQSTIFACSLVVDETEGTYVWVLEQLMVAMKDKMPSAVITDGDLAMRNAIKRVLPNAHHRLCAWHLCRNAASNVKNPEMVSMFRKCMLGDYEVSEFKHRWEVMVKEFRLEDNNWVKEMYDKKRMWATAYIRGKFFAGFRTTSRCEGLHGQLAKFVHSRHDLVAFLKNFDRFLEVLRYNELEADFESVCGDMMLETNLHALERSASKIFTKEVFILVRPAIARGSMMRVIGCTQLMSQTIFTVTKYGRSHKEWQVSYIEQPLLLKCSCQRMESFGLPCDHIIGVMVHLNIQELPNSLVLSRWTMGVKENAIEIRDGRNSIWDSVFDARCGYLDFLCKKMNRLGGRSTTRFNDIKDWVSNKIIVYSEADVSSGEGNENLSDEVGSTLKDPIRVGSKGCAAGSSTQARRRPHKCRQCGVVGHNRTTCPHKRKFDAFVESGVHEDGVSHVSAEGV. 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00383 758 Pfam FAR1 DNA-binding domain 71 162 IPR004330 -
Seca11g00383 758 Pfam MULE transposase domain 282 376 IPR018289 -
Seca11g00383 758 MobiDBLite consensus disorder prediction 108 130 - -
Seca11g00383 758 Pfam SWIM zinc finger 547 595 IPR007527 GO:0008270
Seca11g00383 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 638 IPR031052 GO:0006355
Seca11g00383 758 ProSiteProfiles Zinc finger SWIM-type profile. 557 595 IPR007527 GO:0008270
Seca11g00383 758 SMART 26again6 570 597 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00383 Seca-Chr11 3727220 3729594 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g00383 MULE 3.6e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00383 - - tpra:123913749 693.345