Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00375 ATGATAATGATTCTCTGCATTGTTGTCTTTCCTCCTGACTGTACCATCATTATCATTTCATTTTGTCTCCATTTGCCTTCTAGCTTTTGGACACTTAAATACTGGATAACTAGGAAGTTGGAAGCAAATGGCTCAGATCATACAAGAAATGAAGATGTTCTATCTCGTCTGCTGGGGAACCTGGCAAGTCAGGCTGGTATAATTAATGGAAGTAATATGGCATCCTTATTGGAGGGATCTCAAGATTTGGTAAAAGCTGGGACATCTGGATCTGCACAAAATGTTCAAAACACAGATTCAAATTGTCCTGGACCATCCAGACCTTTCGGTTCTTCTATCAAGATGGGTAATGGTAAAATCCATCAGGACCCTCTGGAGTCTAGGTTACAGTGTGAGATGGTTCTTGCTAATGATATGACACAAAAATGTACACCTTCAGGCAGTGGTGGGGTTGGAAGTTCAAAACCTCCTTTGGGACCACAATCCTCAAATGTACTTCTGTCAAGGGGTAGCCCTCCACCCCAATCAGTTGCAGCAGAGACTACAGTTGGAAGAAATGGCTTAAGTGATATTGACCTGAATAATGTATATGATGATGTGCAGGATTATGTTGAGAACCCCAGGAATTCTCATCCTCCTGTGGCTTCAGGGATTGGGCCTCTTGATCATCCTTCATGGGTACAATGTGACTCTCTAAAGTCAAGTCCACCACAGACAAGTAGAAATTCAGATTCAACCTCTACCCAGTCACCATCTAGTTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGATCCAAATGATTTTCCTCTTGTTCTTCGATCACAGATCCTTAACTGGTTATCCCACAGTCCCACAGAGATAGAGAGCTATATAAGGCCAGGCTGTATCATATTAACTATATATCTCCGCCTAGAAAATCCTGCCTGGGAGGAGCTATGCTATAATCTAGGATCCAGCTTGAGAAAGCTTCTTGCTGCATCAAATGATTCTTTTTGGAGAACAGGATGGGTATACACAAGGGTGCGACACTCTGTAGCTTTTCTGTATAATGGTCAGGTGGTCTTAGATGTGCCATTGCGCCTCAAAAGCCCACAAAATTGTCAGATTTTGTGCATTACACCACTTGCTGTTTCTGCAAGTGCAAGTGCAAAATTTATTGTGAAAGGATTCAACCTTTTCCTGTCTAGCACAAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTGGTACAGGATAATTGTTATGATTTAATTGATGGTGCTGATGCAGCCATTGGACATCATGAGCTTCAGCATCTCAGCTTCTCTTGTCACATACCAAATGTGACTGGAAGAGGGTTTATTGAGGTAGAAGATATTGGTCTTAGCAGCTTTTCCTTTCCATTCATAGTTGCAGAGCAAGAAATTTGTTCAGAAATATGTCAGCTGGAGAATGTCATTGAGGCCGCAGAGACTACTGATGACATCCAGATAAAAACCAAACTAATGGAAGAAAAAACTCGAGCATTGTATTTCATACAAGAAATGGGTTGGCTCCTTCATAGAAGTCGTGTGAAAGTTAGGCTAGGTCCAATGGCACCTGTCCATGATCGCTTCCATTTTAATCGGTTCACATGGCTTGTTGGCTTCTCTATGGACCATGATTGGTGTGCTGTGATGAAAAAACTCTTAGATATTATCTTTGATGGTGCTGTTGATACAGGAGAGCATACCTCCATTAAGCTTGCATTATTAGACATGGATCTTCTACACAGAGCTGTAAAGAGAAATTGCAGGCCTATGGTGGAACTACTGTTAAACTTTGTGCCAGTTAAAGCCTCAGATGGTGAAGACACTAAAGAGAAGCAAGCCAACAAGTCCCCTGACATATTCTTATTTAGACCTGATACTATTGGGCCTGTTGGGTTGACACCCCTTCATGTTGCAGCAAGTACAAATGGCTCTGAGAATGTATTGGATGCATTAACTGATGATCCAGGAATGGTGGGAACTGAGGCGTGGAAAAGTGTCAAGGACAACACAGGTTTGACACCCTATGACTATGCATCCCTGAGGGGCTACTACTCCTACATTCAACTTGTTCAAAGGAAAACAAGCAAGAAATGTGAAAGCCAACATGTGCTTGATATCCCAAGCACCCTTGTAGACAGTAACATAAAGCAGAAGCAATCAGATGGGCACAGGTCATCAAAAGTTTCAAGTTTGCAGACTGAGAAGATTGAAATAACAGCAATGTCACACCAATGTGGGCTCTGCCAACACAAGCTGGCGTACGGTGGCGTGAGAAGGCCACTTGTTTATAGGCCGGCAATGCTGTCAATGGTGGCCATTGCAGCTGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTTACCAAAAGTTTCTTATGTATTCCAGCCCTTCAACTGGGAATCATTGGAGTATGGGTCAATCTAA 2460 0.4264 MIMILCIVVFPPDCTIIIISFCLHLPSSFWTLKYWITRKLEANGSDHTRNEDVLSRLLGNLASQAGIINGSNMASLLEGSQDLVKAGTSGSAQNVQNTDSNCPGPSRPFGSSIKMGNGKIHQDPLESRLQCEMVLANDMTQKCTPSGSGGVGSSKPPLGPQSSNVLLSRGSPPPQSVAAETTVGRNGLSDIDLNNVYDDVQDYVENPRNSHPPVASGIGPLDHPSWVQCDSLKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRSQILNWLSHSPTEIESYIRPGCIILTIYLRLENPAWEELCYNLGSSLRKLLAASNDSFWRTGWVYTRVRHSVAFLYNGQVVLDVPLRLKSPQNCQILCITPLAVSASASAKFIVKGFNLFLSSTRLLCALEGKYLVQDNCYDLIDGADAAIGHHELQHLSFSCHIPNVTGRGFIEVEDIGLSSFSFPFIVAEQEICSEICQLENVIEAAETTDDIQIKTKLMEEKTRALYFIQEMGWLLHRSRVKVRLGPMAPVHDRFHFNRFTWLVGFSMDHDWCAVMKKLLDIIFDGAVDTGEHTSIKLALLDMDLLHRAVKRNCRPMVELLLNFVPVKASDGEDTKEKQANKSPDIFLFRPDTIGPVGLTPLHVAASTNGSENVLDALTDDPGMVGTEAWKSVKDNTGLTPYDYASLRGYYSYIQLVQRKTSKKCESQHVLDIPSTLVDSNIKQKQSDGHRSSKVSSLQTEKIEITAMSHQCGLCQHKLAYGGVRRPLVYRPAMLSMVAIAAVCVCVALLFKSLPKVSYVFQPFNWESLEYGSI. 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00375 819 MobiDBLite consensus disorder prediction 140 192 - -
Seca11g00375 819 MobiDBLite consensus disorder prediction 228 260 - -
Seca11g00375 819 Gene3D - 569 718 IPR036770 -
Seca11g00375 819 SUPERFAMILY Ankyrin repeat 588 702 IPR036770 -
Seca11g00375 819 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 102 616 IPR044817 GO:0003677
Seca11g00375 819 MobiDBLite consensus disorder prediction 226 260 - -
Seca11g00375 819 MobiDBLite consensus disorder prediction 140 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00375 Seca-Chr11 3654201 3660413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00375 39 818 SBP-box Gene Family AT2G47070 46.379 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00375 - - gmx:100776125 1259.97