Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00364 ATGGGACAAGAATCAGATTCCAAGGCCAAGTTGGTGTTAGAGATTTGCTCCATTTCCATGCGTTCTGGGCTGTGTGCTCACAGACATCTCCCAAGCCCACCAGCAAATGCAACTTTCATCGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTTAATGCCATTCGCAAGCGATACCATAAACTAGGTGGGTTTAACTGGTTTTATGGTTCTTTGTTCAATCTACATTCTCTCTCTCTGTCTCTCCTGAATAATGAGTTTTTCTTTTTGGTTTCTATTTTCTCTTCTGTAGCCTTGCAACTTCATCCAGATAAGAACAAACATCCAAAGGCTGAAATTGCTTTCAAGCTTGTTTCTGAGGCATATACATGTCTCTCTAATGCAGCAAAGAGAAAAGCTTTTGACTTGGAGAGGTATAAGCATCTCTGCTTTGAGTGCAGAAGAATCCCATATACATCATCCGGCAATTCTAATGGTTCAGGTTTCAAGGCATGGAATATTATCAGCAGGTCAAGATCTTTTAAACTTTGGAGAAATATTAGGGACATGAGAGAGAGATTCAAGGAGGAGGCTAAGGTGATAGAGAACTGTTTGCGAACAAATTCAATGTCAAGGAAAGAATCTCCACTCTACAATCCGGTTGGTTATCTACACAGAAGCAAGTCACTGCATAGATTTGAGAAAGAAACCCCTGTTTTCAATCCATCAGACTACTTGTACCAAGGCTACCCTCACCTCAGGGGCCATGTTTACAAGAATTCTTCGACATTTTGGTACTTGCAGACAATTAGTATGCTGCACAATGGAAAGAGAGGAGTGCAGAACGCCTCCCCAGTTTTTGAGGTCAAAACAAGGAATACGTTTACAGGCAAATTTGCTTTTGTCCCATCATCATGA 903 0.4142 MGQESDSKAKLVLEICSISMRSGLCAHRHLPSPPANATFIDWYCILGVEENAGVNAIRKRYHKLGGFNWFYGSLFNLHSLSLSLLNNEFFFLVSIFSSVALQLHPDKNKHPKAEIAFKLVSEAYTCLSNAAKRKAFDLERYKHLCFECRRIPYTSSGNSNGSGFKAWNIISRSRSFKLWRNIRDMRERFKEEAKVIENCLRTNSMSRKESPLYNPVGYLHRSKSLHRFEKETPVFNPSDYLYQGYPHLRGHVYKNSSTFWYLQTISMLHNGKRGVQNASPVFEVKTRNTFTGKFAFVPSS. 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00364 300 PANTHER BNAC03G44070D PROTEIN 9 261 - -
Seca11g00364 300 SUPERFAMILY Chaperone J-domain 96 140 IPR036869 -
Seca11g00364 300 ProSiteProfiles dnaJ domain profile. 41 140 IPR001623 -
Seca11g00364 300 CDD DnaJ 41 129 IPR001623 -
Seca11g00364 300 SMART dnaj_3 40 132 IPR001623 -
Seca11g00364 300 PRINTS DnaJ domain signature 112 132 IPR001623 -
Seca11g00364 300 PRINTS DnaJ domain signature 96 111 IPR001623 -
Seca11g00364 300 PRINTS DnaJ domain signature 43 61 IPR001623 -
Seca11g00364 300 Gene3D DnaJ domain 40 143 IPR036869 -
Seca11g00364 300 Pfam DnaJ domain 96 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00364 Seca-Chr11 3565974 3567760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00364 68 137 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.286 6.62e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00364 - - gmx:100801809 424.091