Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00362 ATGGTTCATTTTCCATATTCATTTGTCAATGGATTGGCGAGAACTGTGTCAATCAAGAAAGAGAAGAACTGTAAAAAAAAACATGATGGAAGGAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAAGAAGAATGAATTGTTATTGAGTTCATCTGGAGTTGTTAAGTCAACCAAGGCCAACAGTTTTGTTTCTGTGTTCACTAATAAGGGCCAGAAAGGAGTCAACCAGGATTGTCTTGTGGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTCTGTGGAATTTTTGATGGACATGGCCCTTGGGGACACTTTGTAGCCAAAAGGGTCAGGAAGCTAGTACCAACCTTTTTACTCTGCAATTGGCAGGAAAATCTAGCTGCAACTTCAATTGACCTGGATTTTAAAATGGAAGCAGATAAAAATATCCATGGATTGGACATATGGAAACAATCCTACATAAAGACTTTCTCTGCCGTTGACCAGGATCTGAAGCAGCACACTGGGATTGATTCCTTTCAAAGTGGCACTACAGCTTTGACAATTATCAAACAGGGTGAATATCTTAGCATAGCAAATGTAGGTGATTGTAGGGCAGTCTTGGTAACCACTTCAGAGGATGGAACATTAACTCCAATTCAACTTACCACTGACTTCAAGCCAAATTTACCACAGGAAGCAGAGCGCATAAAACAATCCAGAGGGCGGGTATTTTGTTTGGAAGATGAACCAGGAGTGTACAGGGTCTGGATGCCAAATTCCAAAACACCAGGACTAGCAATATCTAGAGCTTTTGGTGACTACTGTATGAAGGACTTTGGAGTAATCTCTGTGCCAGATGTAACACACAGAAAACTTTCCACCAGGGATCAATTTATCATCTTGGCAACAGATGGGGTATGGGATGTTATATCTAACCAAGAAGCAATGAAGATTGTTTCTGAAACGCAACATAAAGAAAAAGCAGCTAAGAGGCTAGTGAAATGTGCCATACGTGAATGGAAACGAAAGAGAAGTGGCATTGCTATGGATGATATGTCAGCTATTTGCCTCTTCTTTCACTCTTCCCCCTTTCATCAACACCCAGCCACTAAAGTTGTTGATTAA 1110 0.4081 MVHFPYSFVNGLARTVSIKKEKNCKKKHDGRKAVEELAKEAKKNELLLSSSGVVKSTKANSFVSVFTNKGQKGVNQDCLVVWEEFGCQQDMMFCGIFDGHGPWGHFVAKRVRKLVPTFLLCNWQENLAATSIDLDFKMEADKNIHGLDIWKQSYIKTFSAVDQDLKQHTGIDSFQSGTTALTIIKQGEYLSIANVGDCRAVLVTTSEDGTLTPIQLTTDFKPNLPQEAERIKQSRGRVFCLEDEPGVYRVWMPNSKTPGLAISRAFGDYCMKDFGVISVPDVTHRKLSTRDQFIILATDGVWDVISNQEAMKIVSETQHKEKAAKRLVKCAIREWKRKRSGIAMDDMSAICLFFHSSPFHQHPATKVVD. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00362 369 ProSiteProfiles PPM-type phosphatase domain profile. 62 354 IPR001932 -
Seca11g00362 369 Pfam Protein phosphatase 2C 86 333 IPR001932 -
Seca11g00362 369 CDD PP2Cc 62 354 IPR001932 -
Seca11g00362 369 FunFam Probable protein phosphatase 2C 34 53 356 - -
Seca11g00362 369 SUPERFAMILY PP2C-like 56 355 IPR036457 -
Seca11g00362 369 SMART PP2C_4 53 352 IPR001932 -
Seca11g00362 369 Gene3D - 48 356 IPR036457 -
Seca11g00362 369 PANTHER PROTEIN PHOSPHATASE 43 352 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00362 Seca-Chr11 3529397 3532193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00362 1 355 PP2C-type Phosphatase Gene Family AT3G05640 62.079 8.74e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00362 - - gmx:100814087 645.195