Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00337 ATGGGTGGTCAGATGCAGCAGAGCAATGCTGCCGCCACTGCTCTGTATGACCACGGTGCACCCACCGATGCCGGCGACGCCGTCATGGCGCGCTGGTTGCAATCCGCCGGCTTGCAGCATCTGGCCTCTCCATTGGCTTCCACTGCTATCGATCAACGACTCCTCCCTAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCCGAAGAAAAGCAGAGGCTTTTTAAGTTAATGAGAAACCTAAATTTTAATGGGGAATCTGGCTCAGAGCCATATACGCCGACTGCTCAAAGTTTTGGTGGAGTGGCTGTATCAGATGGGTTTTATTCTCCTGAGTTTAGGGGGGATTTTGGAGCTGGGCTTTTGGATCTTCATGCTATGGATGATACGGAGCTTTTGTCCGAGCATGTTATTTCAGAACCCTTTGAACCATCACCCTTTATGCCCGGAGGTACCAGAGTATTTGAAGATGACTTCGATCCCATTAGCAGCAAGCAGGAAGGAGAACCAGATACAGATGCATCACTTTTTTTACCTATGAATGAGAAAGAGAATAATACAAGAGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTCTAAATAAGAAGGAGCTCGCTAAGAAAGAGGATGATATTGTTACTGTATATGAAAATGCATATTTGACAGTCCATGAACCCAAACTAAAGGTTGACTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTTCTTGATGAGAATGTTACCAATGATGAAGTATATCGAGTTACAGTACAACCAATTATTCCTACAATTTTTGAGAAGACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGTAAAACATACACGATGCAACCATTACCACTCAGAGCTGCAGAAGACCTTGTCAGACAGTTGCATCAGCCAGTTTACCGGAATCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTTTGATCTTCTTAGTGACAGAAAGAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTTTGTATTGTAGGATTGCAAGAATTTGAAGTTTCTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGCAATTCAGCAAGAAGTACAGGATCCACTGGTGCAAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAACTGGTTGTAAAGAGGCACAATGAGATAAAAGAGAGCAAGCGGAACAATGATGGAAATGAGGCGAAAAGTGGGAAGGTTGTGGGGAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACCACTGATAATGACCGTCAGACAAGGATTGAAGGGGCAGAGATAAATAAGAGTCTTTTGGCTTTGAAGGAGTGCATTCGTGCATTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGCAAACTTACAGAAGTGCTCCGTGACTCCTTTGTTGGCAATTCAAAAACTGTTATGATCTCTTGTATATCTCCAAATGCTGGATCTTGTGAACACACGCTAAATACCTTGAGATATGCAGATCGAGTTAAAAGTCTATCCAAAAGTGGAAATCCTAGAAAGGACCAGGCCCCAATTCCAACGCCACAAACAAATAAGGAGGTTTCATCCACATCATCCCTTCCAGCTAGTGTTGGTGCACATGATTTTAGTGATCAACGTCAAGAGGTGAAGACAGTGGATATGGGCAGGAAAGTTATTGAAAAGGAAAACTCTTTATACAGATCTGCTGCTGATGTTGACAAACAACCATCAAGCTTTTCTTCAAGTTATCCATTCAATGGGCGAGAGGAAAAAGGCTTGGCTTCTGCCTCAATGGACAGGGACAGGTTTGCAGTGAAGAATTCTTACAATGATTCTACCAGTCAAAAGATGAACTCTTATTCCCAAAATGATACAGATGAGAGAGTGCAAAAGGTCTCTCCCACACGCAGAAAAGGGTCCAAGGAGGAGAAGTCTGAAAGGTCTGCAAACTGGCTGAAAAGGGATACCAATGGTTCTGATCACTTAACCACAAGCTCCAAGCAGCAGAGCGCAGGGAATTATAACACAGTTACCACTGGATCCAGACAGTCTGAAACAGAATCCTCTCCTGATGTGAACATCAGTGCAATACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTATTGGCCGAAGTGGACCAGCCAGGAAGTCTCATTGACAACTACGTAACCCAGTTGAGTTTTGTGCTTTCTCGCAAAACAGCTAGTCTCGTCAGTCTTCAAGCTCGCCTGGAAAGATTCCAACATCGACTAAAAGAACAGGAGATACTAAGTAGAAAAAGAGTACCCCGTTAA 2415 0.4306 MGGQMQQSNAAATALYDHGAPTDAGDAVMARWLQSAGLQHLASPLASTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTAQSFGGVAVSDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGTRVFEDDFDPISSKQEGEPDTDASLFLPMNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVYENAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVQPIIPTIFEKTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNSARSTGSTGANEESSRSHAILQLVVKRHNEIKESKRNNDGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPIPTPQTNKEVSSTSSLPASVGAHDFSDQRQEVKTVDMGRKVIEKENSLYRSAADVDKQPSSFSSSYPFNGREEKGLASASMDRDRFAVKNSYNDSTSQKMNSYSQNDTDERVQKVSPTRRKGSKEEKSERSANWLKRDTNGSDHLTTSSKQQSAGNYNTVTTGSRQSETESSPDVNISAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKTASLVSLQARLERFQHRLKEQEILSRKRVPR. 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00337 804 CDD KISc_KIF2_like 194 526 - -
Seca11g00337 804 Gene3D Kinesin motor domain 176 531 IPR036961 -
Seca11g00337 804 Coils Coil 777 797 - -
Seca11g00337 804 MobiDBLite consensus disorder prediction 593 608 - -
Seca11g00337 804 PANTHER KINESIN-RELATED PROTEIN 6 23 802 IPR027640 GO:0003777|GO:0007018
Seca11g00337 804 MobiDBLite consensus disorder prediction 678 714 - -
Seca11g00337 804 MobiDBLite consensus disorder prediction 532 561 - -
Seca11g00337 804 ProSiteProfiles Kinesin motor domain profile. 194 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g00337 804 MobiDBLite consensus disorder prediction 590 714 - -
Seca11g00337 804 MobiDBLite consensus disorder prediction 630 651 - -
Seca11g00337 804 Coils Coil 721 752 - -
Seca11g00337 804 MobiDBLite consensus disorder prediction 652 677 - -
Seca11g00337 804 Pfam Kinesin motor domain 200 527 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g00337 804 ProSitePatterns Kinesin motor domain signature. 427 438 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca11g00337 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 528 IPR027417 -
Seca11g00337 804 PRINTS Kinesin heavy chain signature 478 499 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g00337 804 PRINTS Kinesin heavy chain signature 275 296 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g00337 804 PRINTS Kinesin heavy chain signature 385 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g00337 804 PRINTS Kinesin heavy chain signature 428 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g00337 804 FunFam Kinesin-like protein 174 531 - -
Seca11g00337 804 SMART kinesin_4 192 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g00337 804 MobiDBLite consensus disorder prediction 528 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00337 Seca-Chr11 3304902 3313105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00337 186 528 Calmodulin-binding Proteins AT5G65930 34.085 6.62e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00337 K10393 - gmx:100778915 1410.97