Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00334 ATGGACGATCCTCAGTACCCAAACAACCCTTCACCCTACCCTCATCAACATGCTCCCATTCCAAAGCAGCACTCCGATAACGATCAAAGCAGCACCGCTGAGTTGCGCGCTCTCGATTGCAACCTTGCTTCCCTTTGCGAACATGTACAAATCGAAGGTTTCAATTCCGGTTCTTTCTCCGATATCGTCGTCAATGCAATGGGCTCCACTTATCACCTCCATCGTCTCATCCTCTCCCGCAGTTCATATTTCAGGAACATGCTTCATGGGCCTTGGAAAGAAGCCAGTGCTCCTATTGTGACTCTGCATGTCGATGATAAGAATGTCAATGATGAGGCAATTGCAATGGCTTTGGCATATCTATATGGGCACCACCCTAAGCTTAATGATAATAATGCATTTCGAGTTCTTGCTGCTGCTTCCTTTCTTGATCTTCAGGATTTATGTGCAATATGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGATTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTACCTTTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTACATGCGTTACTGACCTCTAATGATTTGTGGATACCCAGTGAAGAGAAGCGGTTTGAATTGGCTTTGCACACATTCCTGGAAAAAGGTGCTCACTGCAAGGTCGAAAGTCCTGTGCATGGAATTACTGGTTCTGAGTCTGCAACTGGTATTCATTGTGATTCTGATAACACTAAGGGAAAAAGTGTAACTGATAGCTGTGCTAATAAGAGGTTGGAAACTGACATAGGGAAAATGAGTCTTAAAAGTGATCTAAAGGACCCTAGCACTCCTAATCATCTAGTTGAGCTTGCAGACTCAGTGGTAGACTTCAGCAATGGGGTTTCTGATTCCAATAAACGGGTTCAACAAGCTTCATATGTCAGTTCACCCAACCTGAATCCAAAGTATCCTTGTGACATAGAAGGGCCTTCATTGTCTGATACAGATGGGATGAGAACATCATGTTATGTTGAGGTGCCTCTTGGTGCTGGAGCAACTGGTTTGGGAACTACTGGTGGAGTGGGTATTGAAGGGCCATCTGAGGAAGGACCCTGCTACAATTTGGATAACAATAGTTGGTTAGTTAGGGATCAATCAAGACATTGTTTTTCATCGAATTCTTGTAATGGGCTCACATCCAGTGATTGGGGAAGATATGGAACGCCTCTGTTTTCATGGGGTGGTCATGTTGTTGGCAGAAGACAGCCTAAAGCTCATCCCAGAGGAAACTATGGAGGTCAAGGAGATGAATATGATGCATTTCTTAATATATTTGAAGGGGGTTCCCTTTTATATTGCAATATGTCTTTTGATGCACTTCTGAATGTTAGAAAGCAGCTTGAAGAGTTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTGTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATCGCTGCGGATACATGCAAAGTTTGTTCCCTTATGAGTATGGCCTGCACTTGCCAGAAGCAGTTTGCATTTTCACATGGAGCTACTACCACTGGATCTTACATGCAAGAACATAATCAGAACAATATGCCCGGGAATGTAGGAAATATATATGTCGCCGAATCTTCTCCAGGCGAAAGAAATGGCCCTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCTGGCATTGGGCGTGGAACTACACTTGTTCCAGCAGCTGCTTCGCCTCCTACACGATTTGTCTTTTCTCGTGTACCCTTTGGTGTTGGCAACAGAAACTACCCCCAGTCTGCAGCCAATGATGATTCAGAGGCACGTGCTGACCACAATGGAGACCTGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGCCAGGGAGGGAGTAATGGAACAAATGTACATACAGAGCTAACACAAAGGGGATATGAAATGGGCTTGCAAAGCAGCATGTCTGGAACTACTGCTGGTGGTGCAAGTACTGGTGGCATTCCCATGCAGATGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGAGAATTCGAACAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTTCCCCCTTTTCGTTTTGGGTAA 2205 0.444 MDDPQYPNNPSPYPHQHAPIPKQHSDNDQSSTAELRALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPSEEKRFELALHTFLEKGAHCKVESPVHGITGSESATGIHCDSDNTKGKSVTDSCANKRLETDIGKMSLKSDLKDPSTPNHLVELADSVVDFSNGVSDSNKRVQQASYVSSPNLNPKYPCDIEGPSLSDTDGMRTSCYVEVPLGAGATGLGTTGGVGIEGPSEEGPCYNLDNNSWLVRDQSRHCFSSNSCNGLTSSDWGRYGTPLFSWGGHVVGRRQPKAHPRGNYGGQGDEYDAFLNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMSMACTCQKQFAFSHGATTTGSYMQEHNQNNMPGNVGNIYVAESSPGERNGPFRPVRVHVRGAIDGLAGIGRGTTLVPAAASPPTRFVFSRVPFGVGNRNYPQSAANDDSEARADHNGDLSGDGLTALVGLSQGGSNGTNVHTELTQRGYEMGLQSSMSGTTAGGASTGGIPMQMLETPEHTIGIEWENSNSSSISLDLKTPLSHFPPFRFG. 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00334 734 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 13 734 - -
Seca11g00334 734 MobiDBLite consensus disorder prediction 1 31 - -
Seca11g00334 734 SUPERFAMILY POZ domain 54 158 IPR011333 -
Seca11g00334 734 ProSiteProfiles BTB domain profile. 60 130 IPR000210 GO:0005515
Seca11g00334 734 MobiDBLite consensus disorder prediction 1 17 - -
Seca11g00334 734 Pfam BTB/POZ domain 54 158 IPR000210 GO:0005515
Seca11g00334 734 Gene3D Potassium Channel Kv1.1; Chain A 27 193 IPR011333 -
Seca11g00334 734 SMART BTB_4 60 160 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00334 Seca-Chr11 3282185 3286199 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Seca11g00334 BTB 3e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00334 - - gmx:100806711 1259.59