Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00330 ATGGAGGATTCATTAGGGCAAAAGTGGAAGAACAGAGAGTTCGCTTTGGTATCAGTTGCCGACCTCTCTTCGGTTTCTTCTTCTGCTTCGCCCGGGATTGCTCGCTTCGACTCTAACGGTCTCCAAATTCATCAACAGTCTCAACAGATTCCATTCAATGTCGATCTCAGAACTGCTCAGCTATTCAGATTGGGTTCTGTTCAATCGGTTTGCATGGTGGAAGGTTCTGATGCTGATCAAAAGATATCATATTCCAGGGGAGTCACTATCCAGTTTAGAAATGAGGAGGAGAGTGCAGCCTTCCACTCTGTAGTCCAACAATGGAAGAAGGAAGCCAATGTTCAAGGAGGAAACTTACCAAATGGAACATTAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGCCGTCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCACCAGCAAAATATGTTGCAGGACTATGTGCGAACAGGAACCTATTATGCTGCTGTTATTGAGAACCGTGCTGATTTCCTTGGTCGTATAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCAACACTGGCTCAACGAATTACAGTGATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACTTTGTTGGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTCCTCACTCCTACTGGGAAAATGTTTCCTGGAGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATTGAAATTGCTAATAAGGCCCTGTTCTGGCAGCAGCAAAACTACTACGGTGTTGATTTGACACCCTTACATGGGACTGCATTTCAGGGATACTTTTCTCAGCCTGTTGTGGATGCTTTTGATCCAAGATTATTAATAGCTCCCCCAATGTTCCATGTGATAGACTTCACCAAAATAAAGGAAGAAGAATTGTATGAAATTGACATTCCTCTGAGATTTATAGCCTCTGTGGGTGCCAGAGTACATGGGTTGGCGTGTTGGTTCGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCGACAACCCATTGGTACCAGTTACGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGAAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATATATTTAACATTGTCAGAAAAATCTCTATTTGCATTAGCTAAAATGTGGGGTCCTGGTGCTGAGCAAGGGGGGATTCTTCAAACATCATCATGTAAGCTTGATCTGAAAGAACCCTACTATAGAATGTCTCAACCTCAAGCTTATGCATTAGCCCAAGATCAGCAACCTCAACCACTCATACAGACTCAGGATATACATATCCAATCTCAGGAATTGGATGAACCCGATATAATGCAACAACCTTCGCCTAATCGATGTGCTCAAATTGATTCACTGATGCAGAATGTTTAA 1629 0.4217 MEDSLGQKWKNREFALVSVADLSSVSSSASPGIARFDSNGLQIHQQSQQIPFNVDLRTAQLFRLGSVQSVCMVEGSDADQKISYSRGVTIQFRNEEESAAFHSVVQQWKKEANVQGGNLPNGTLITSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFLGRIVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPTLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVIDFTKIKEEELYEIDIPLRFIASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSEKSLFALAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLIQTQDIHIQSQELDEPDIMQQPSPNRCAQIDSLMQNV. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00330 542 FunFam Probable histone-arginine methyltransferase CARM1 285 500 - -
Seca11g00330 542 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 93 454 IPR025799 GO:0016274|GO:0018216
Seca11g00330 542 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 451 IPR029063 -
Seca11g00330 542 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Seca11g00330 542 Pfam Ribosomal protein L11 methyltransferase (PrmA) 179 252 - -
Seca11g00330 542 Gene3D - 285 500 - -
Seca11g00330 542 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
Seca11g00330 542 CDD AdoMet_MTases 182 282 - -
Seca11g00330 542 Gene3D Vaccinia Virus protein VP39 123 283 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00330 Seca-Chr11 3247580 3255224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00330 71 432 C2H2 Transcription Factor Family AT3G12270 30.526 1.10e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00330 K05931 - gmx:100780736 947.577