Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00179 ATGGCTCCGAAGGCTTTGATCTTTTTGGCTCTGTTAACCTTTTCAGCTCTGTCTCTTAGTCCTTCTTTTGCAGAGGATGCACAAGACACTGGCCTTGTTATGAACTTCTACAAGGAAACATGTCCTCAGGCTGAAGACATCATCAAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCTTGGCTCAGGAACATTTTCCATGATTGTGCTGTTCAGAGTTGTGATGCTTCACTTTTGCTGGACTCCACAAGAAGGACCTTGTCTGAGAAGGAGACTGACAGGAGCTTTGGGTTGAGGAATTTTAGGTACATTGAGACCATCAAAGAAGCTGTGGAGAGGGAGTGCCCTGGAGTTGTTTCTTGTGCTGATATCCTTGTTCTCTCTGCCAGAGATGGCATTGTTGCGCTTGCTTTGTTGCAGCTGGGAGGTCCTCATATCCCTCTTAAAACTGGAAGAAGGGATGGTAGAAGGAGCAGAGCAGAAGTGGTTGAGCAGTACCTCCCAGACCACAATGAATCCATTTCTGCTGTTCTTGAGAAGTTTGGTGCCATGGGAATTGACACCCCGGGAGTAGTTGCTTTGCTTGGAGCACACAGCGTTGGTCGAACCCACTGTGTGAAGTTGGTGCACCGTTTGTACCCAGAGGTTGACCCAGCACTGAATCCAGACCATATCCCCCACATGCTGAAGAAGTGCCCTGATGCCATTCCAGACCCCAAGGCGGTTCAGTATGTGAGAAACGACCGTGGCACACCCATGATTCTAGACAACAACTATTACAGAAATATATTGGACAACAAGGGTCTGTTGATAGTGGATCACCAATTAGCCAATGACAAAAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGGAATTTTCTAAAGCCATTACCTTGCTCTCTGAAAACAACCCTCTCACTGGCACTAAGGGTGAGATCAGAAAACAGTGCAATGTTGCCAACAAACACCATGATGAGCCTTAA 1020 0.4667 MAPKALIFLALLTFSALSLSPSFAEDAQDTGLVMNFYKETCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVALALLQLGGPHIPLKTGRRDGRRSRAEVVEQYLPDHNESISAVLEKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEVDPALNPDHIPHMLKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSKAITLLSENNPLTGTKGEIRKQCNVANKHHDEP. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00179 339 Gene3D - 35 333 - -
Seca11g00179 339 FunFam Peroxidase 173 312 - -
Seca11g00179 339 ProSiteProfiles Plant heme peroxidase family profile. 31 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 PANTHER - 15 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 SUPERFAMILY Heme-dependent peroxidases 32 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca11g00179 339 FunFam Peroxidase 35 183 - -
Seca11g00179 339 CDD secretory_peroxidase 31 331 IPR033905 GO:0004601|GO:0042744
Seca11g00179 339 Gene3D Peroxidase, domain 2 173 312 - -
Seca11g00179 339 Pfam Peroxidase 49 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00179 Seca-Chr11 1844494 1847379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00179 1 336 Peroxidase AT4G21960 78.274 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00179 K00430 - gmx:547513 609.757