Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00150 ATGCGTTCCAAAGAAGCAGAAAAGAAGCGTGCTTTTTTTACCATTGAAGATCGGAAGCAGGTTTTAGATGATACTAATGTGTTACAAATCCATTGGGAAACTGTGAGTTGTGGTTTCCTATTTGAACAGGCTACCTTAGTTCAAACATTTGGACAGAGGAATCATGCCATTATAAGATATGGTGTGTCAATATCTGGTGTGATAGAAAATTCTAAACAGGTTGAGCTGAGGACATTCTTTTATGTCTGTGACCAAGATGAAAGCTACCCAAGAGGCGTTCATTTGGAAATGACTGCACAGAATGTGACAGTTATTTCAGTTCATATAATCACTTGTACTCCTCTCATAATTTCTACACTTGCCATATGGATTTTAATGTTTGCTTGTAGACTGAGAAATGTTGGAGAAGTCATTGATGAAAAAACATGTGAAGAAAGGCTTTGGAATATAAAACACCGTGGGGAAACAAACTTTTACTTATGTGAAATCAAGATTGCCACCGTGGTGCTGCCAGGTGTCGTTGGCATAACAGCAGAAGCTCTTGGCAGGGTACTAGTGCTGGACCTTGCTATCAGAAATGAAGATAGGTTCTCTTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCACATTTGTTGTTGTCTGAAAAGCTGATCTCTGCAAATACAGATACACTAAAAGCAGCTTTTGATTCTGCAATTAATCGATACAGACCAAAGGTGATTAAGGCACTTCAAAAAGAAAGATGGTCAACTTCAGTAAATAGTAGATTAAATTCTCATAATCCTGGCTTGATATCACAAGCCTCTGATCTTTCAGAGATTGCAGAATCACCAAGATCCAATGACACTAGCCTTAAAAGTCAAACATCAGGAGAAGCATTGTCTTTTGACCTTAACATTGTAGCCATTGATTCTTGTGTTCGTCAACGACCCCCTACTGGAAAACATGCAAATGATCAGGTTAATTACTTGAAGTTGGTTAAGTTGCTGATCAATAGTGCTGAGTATGCCTTAAACCTCTTATATGATATAACTGAAGGGAAATTAGGATGTCCTCCACCAGAAGAAATGAGTATGTCCCCCCAGGCGCTCATGGCGTGA 1101 0.3942 MRSKEAEKKRAFFTIEDRKQVLDDTNVLQIHWETVSCGFLFEQATLVQTFGQRNHAIIRYGVSISGVIENSKQVELRTFFYVCDQDESYPRGVHLEMTAQNVTVISVHIITCTPLIISTLAIWILMFACRLRNVGEVIDEKTCEERLWNIKHRGETNFYLCEIKIATVVLPGVVGITAEALGRVLVLDLAIRNEDRFSCRELRWRGNSAHLLLSEKLISANTDTLKAAFDSAINRYRPKVIKALQKERWSTSVNSRLNSHNPGLISQASDLSEIAESPRSNDTSLKSQTSGEALSFDLNIVAIDSCVRQRPPTGKHANDQVNYLKLVKLLINSAEYALNLLYDITEGKLGCPPPEEMSMSPQALMA. 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00150 366 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 174 361 IPR035010 GO:0004721|GO:0009737|GO:0043622
Seca11g00150 366 SUPERFAMILY Protein kinase-like (PK-like) 175 320 IPR011009 -
Seca11g00150 366 Gene3D - 164 346 IPR036940 -
Seca11g00150 366 Pfam Actin-fragmin kinase, catalytic 178 284 IPR015275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00150 Seca-Chr11 1591186 1595166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00150 181 356 Protein tyrosine phosphatase (PTP) family AT5G23720 53.591 2.71e-54 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00150 K14165 - gmx:100799468 261.151