Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00136 ATGGCCAAAAGGACTAGTGTTGCTTCCATAGCTTTACCATCCCTATGCATTTTCATGTCCATCTTCTTCGTTTCAATAACTTGCTTTCAAGAAGACCGATCCATATACTTGGTCTTGTTAGAAGGAGACGCGGTTGCTTTCCATGATGATTCATCAAAATTTGACCCCAACAGCGAAACCTCGAAGGCATATGCAAAGCACTTATTGGCATCTCACGATCTGCTTCTGCAAAACGCTTTAGAGAATGGAAGCTACAAAAAACTCCACAGTTTCAAACACATTATTAATGGTTTCTCTGTCCACACAACCCCTTCCCAGGCTAGAAGACTGAGAGGTACCCATGGAGTGAAGTTGGTAGAGAAAGACAGAGGAGCGAAATTGATGACAACGTACACTCCTGAGTTTCTGAATTTACCGAAAGGAATATGGACACAGGAAGGAGGAGACAAAAATGCAGGTGATGGAGTTGTGATTGGTTTTGTTGATAGTGGCATCAATCCAGCTCATCCCAGCTTTGCTTATGATCCCATTCAACCTTTCCCATCAAACCTCTCTAATTTTGCGGGTGCATGTATGACGGGTCCTTTATTCTCAGCTAGGTCTTGCAATGGAAAGATACTCTCAGCGAGGTACTTCTCAGCTGGGGCTCAAACTATTGCTACCCTTAATGCTTCAGTGGATTTTCTTTCACCTTTTGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTCCCGTTTTTGTGAATGATTTTTTCTATGGGCGAGCCAGTGGAATGGCACCACGTGCAAGGATTGCTGTTTACAAGGCTATTTATCCAACTGTGGGGACTCTAGCAGATGTTATTGCAGCTATTGATCAGGCTGTTCTGGATGGGGTGGATATCTTAACACTCTCTATTGGACCAAAGGAACCACCACAAGACACGTTGACCTTCTTGAGCATATTTGATATTGCCTTGTTATTTGCACGAAAAGCAGGAGTTTTTGTGGTGCAAGCTGCAGGAAATAATGGTCCTTCATCTTCAACTGTAATGTCATTCGGTCCCTGGAGTGTGGGTGTTGCAGCTTGCAACACAGATAGAAGGTACCCTGCTTCACTTCTTCTTGGAAATGGCCAAATATTAGATGGTGTGGGACTATCAGGACCAAGTTTTGGAAATGGGACAGTTTATCATAAGCTTGTATTAGCTAAGGATGCAGTCAAAATAAATGGAACATTCCCATGGACTCAGGAGTACATAGAAGAGTGCCAACATCCAGAAGTTTTTGACCATAATATAGTTTCAGGAAGTATCATTATCTGCAACTTCTCAGTTGGCTTCTACAATGGAACCTCAACTCTTGCTGCCATTATTGACACCGCAAAAGCTCTAGGATTCGAGGGTTTTATTCTAGCTGCGAACCCAAGCTATGGTGATTATATTGCAGAGCCAGTTCCTTTCAATATTTCTGGTATTTTGATCCCTCATGTAGCTGATGTCAAGGTTATATCAGAGTATTATGAAGAACAAACCAAGAGAGATGAGAGAGGAATTGCCACAGAATTTTGTGCTGCAGCAGCTGTGGGGGAAGGAAGAGTCGCCTCTTTCACAGGGCGATCACCCGTTGTTAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACACTCAAAAAAATCCTGTTGATGTACTTAAACCTGATATTCTTGCTCCAGGGCACCAAATATGGGGAGCCTGGAGCCCCATTAGTGCCTTGCAACCTATGCTGATAGGGGAAAGTTTTGCATTACTATCTGGCACCAGCATGGCCTCACCACATGTGGCTGGAATCGCAGCACTTATCAAGCAATATAATCCATCATGGACTCCATCTATGATAGCATCTGCAATCTCCACAACCAGCTCAAAGTATGATAATCTTGGAGAGGATATCATGGCTGAAGGCTTTGAAATCAACAGCTTGTATCCCTCCACTCCTTTTGAATATGGGGCGGGCATTGTGAACCCCAACTGTGCCATTGATCCAGGGTTGGTACTATCATCAGGTTATGCAGACTTCATCAGCTTCTTGTGCTCTTTGCCAAACATCAACAGTGATACAGTAGTTGCAGCCACTGGAGAACCTTGCAATAACCCGTTTGAGTATCCATCCAATCTAAACCTTCCTTCAGTAACGATATCTTCACTAAGAGGAACAGTTTCTGTCCGAAGAACTGTCATGAATGTAGGGAACGTCACAGAGACATACTTAGGCTCAGTTCTACCTCCAAATGGAACTACTGTCAACCTGTATCCAACTTGGTTTACCATAAGTCCACAAGGAACACAAGATCTGGTAATACAACTAAGTGTCATCCAATCAATGGAAAGTTTTAACTTTGGTGAAATTGTTTTGACAGGAGATTTGAACCATATTGTAAGAATAACATTATCAGTCGTACCAATTTCAGTATAA 2457 0.429 MAKRTSVASIALPSLCIFMSIFFVSITCFQEDRSIYLVLLEGDAVAFHDDSSKFDPNSETSKAYAKHLLASHDLLLQNALENGSYKKLHSFKHIINGFSVHTTPSQARRLRGTHGVKLVEKDRGAKLMTTYTPEFLNLPKGIWTQEGGDKNAGDGVVIGFVDSGINPAHPSFAYDPIQPFPSNLSNFAGACMTGPLFSARSCNGKILSARYFSAGAQTIATLNASVDFLSPFDADGHGSHVASIAAGNAGVPVFVNDFFYGRASGMAPRARIAVYKAIYPTVGTLADVIAAIDQAVLDGVDILTLSIGPKEPPQDTLTFLSIFDIALLFARKAGVFVVQAAGNNGPSSSTVMSFGPWSVGVAACNTDRRYPASLLLGNGQILDGVGLSGPSFGNGTVYHKLVLAKDAVKINGTFPWTQEYIEECQHPEVFDHNIVSGSIIICNFSVGFYNGTSTLAAIIDTAKALGFEGFILAANPSYGDYIAEPVPFNISGILIPHVADVKVISEYYEEQTKRDERGIATEFCAAAAVGEGRVASFTGRSPVVSRFSSRGPDIIDTQKNPVDVLKPDILAPGHQIWGAWSPISALQPMLIGESFALLSGTSMASPHVAGIAALIKQYNPSWTPSMIASAISTTSSKYDNLGEDIMAEGFEINSLYPSTPFEYGAGIVNPNCAIDPGLVLSSGYADFISFLCSLPNINSDTVVAATGEPCNNPFEYPSNLNLPSVTISSLRGTVSVRRTVMNVGNVTETYLGSVLPPNGTTVNLYPTWFTISPQGTQDLVIQLSVIQSMESFNFGEIVLTGDLNHIVRITLSVVPISV. 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00136 818 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 82 811 IPR045051 -
Seca11g00136 818 CDD PA_subtilisin_like 373 508 - -
Seca11g00136 818 Pfam Fibronectin type-III domain 719 813 IPR041469 -
Seca11g00136 818 ProSiteProfiles Serine proteases, subtilase domain profile. 130 674 - -
Seca11g00136 818 ProSitePatterns Serine proteases, subtilase family, histidine active site. 237 247 IPR022398 -
Seca11g00136 818 Gene3D - 691 815 - -
Seca11g00136 818 Gene3D Peptidase S8/S53 domain 155 687 IPR036852 GO:0004252|GO:0006508
Seca11g00136 818 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Seca11g00136 818 CDD Peptidases_S8_3 126 636 IPR034197 -
Seca11g00136 818 Gene3D - 367 535 - -
Seca11g00136 818 Pfam Subtilase family 153 638 IPR000209 GO:0006508|GO:0008236
Seca11g00136 818 Pfam Peptidase inhibitor I9 55 127 IPR010259 -
Seca11g00136 818 ProSitePatterns Serine proteases, subtilase family, serine active site. 600 610 IPR023828 -
Seca11g00136 818 SUPERFAMILY Subtilisin-like 127 678 IPR036852 GO:0004252|GO:0006508
Seca11g00136 818 PRINTS Subtilisin serine protease family (S8) signature 599 615 IPR015500 -
Seca11g00136 818 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Seca11g00136 818 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Seca11g00136 818 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 127 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00136 Seca-Chr11 1483463 1487128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00136 15 816 Subtilisin-like Serine Gene Family AT1G62340 61.050 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00136 - - gmx:100798915 1266.52