Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00131 ATGATCCAAGTACATCTATTCTTTTCACCCGTTCCTTATTCTAAAGAAAAGCAAAAACTAAGAGCCAGTCTGTCTCGTGTTTCCCTATTCTACGTATCCGTTGCTCTCAAGTCTCCTTGTCCTAGAATGAGAGCCTCACAGCATCAGCCCCAACAGAGAGGATGCAGGGCATTGTGTTGCAGTTGCAGGTTTAGTGTTTCTTCCTCAGAGGAAGCAGAGAGCTCTGCCTCTGATAGGTTCCCTTCTGTTTCTAGCTTAGCACATGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAAGACGGAAGCTAGACATGTTGTAGAGAGAAGAAGGCAACAAAGCAGAGACAGAGAAGGATCCAAGTTCGTTGTAATGGTTGCAATGGAGAAATGCTCTTATGATCCGAGAGAGGATTTTAAGGAGTCCATGATGGAGATGATAATTGCAAATCGCCTCCAAGAAGCGAAAGATCTACGTAGTCTATTGAACTATTATATCTCCATGAACTCCAACAAGTACCATAGTCTAATACTTGAGGTTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATCATGTCAATGCCAACAATGGTGA 603 0.4212 MIQVHLFFSPVPYSKEKQKLRASLSRVSLFYVSVALKSPCPRMRASQHQPQQRGCRALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQMIREKTEARHVVERRRQQSRDREGSKFVVMVAMEKCSYDPREDFKESMMEMIIANRLQEAKDLRSLLNYYISMNSNKYHSLILEVFHEVCTNLFLSSCQCQQW. 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00131 200 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 192 IPR038933 GO:0045892
Seca11g00131 200 ProSiteProfiles OVATE domain profile. 130 189 IPR006458 -
Seca11g00131 200 Pfam Transcriptional repressor, ovate 134 191 IPR006458 -
Seca11g00131 200 NCBIfam uncharacterized plant-specific domain TIGR01568 128 191 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00131 Seca-Chr11 1430468 1431938 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca11g00131 Ovate 4.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00131 - - var:108330150 242.662