Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00093 ATGGAAGTCCAATCTTCCTTCATAGTCATTACCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACTCTTAATACTTTGGCTTGTAAAGAACTACAGGGCAAAGAGTCAGCATAAACTGCCACCAGGGCCATGGAAGTTACCTCTCATAGGGAACCTGCATCAACTAGCTGCAGCAAGCTCACTTCCTCACCATGCTCTCCGAGAACTTGCCCAAAAATATGGACCCTTGATGCATCTACAGCTAGGTGAGATTTCTGCAGTGGTTGTGTCATCCCCCAATATGGCCAAGGAAATAATGAAAACAAATGACCTTGCTTTTGCACACAGGCCACGATTTCTTGCTTCTGATATTATGGGCTATGGATCAGTTGACATCGCCTTTGCTCCATATGGTGATTACTGGAGACAAATGAGGAAAATATGTACATTGGAGCTTCTTAGTTCCAAGAAAGTTCAGTCTTTCTCCCATATTAGAGAAGATGAGGCAGCTAAACTCATGGAAATAATTCAGTCATCTATAGGTTCACCAATCAATCTCACTAACAAGATTGACTCTTTTATAAGTACCTTTGTTTCCAGAGCAGCATTTGGTAACATATCTGAAGATCATGAAGAATTTATATTGATTGTAAAAGAAGCAACACAACTATCAGATGGTTTTGATCTTGCTGATTTGTTTCCTTCTTTGAAACCTATACATCTCATAACTGGGTTGAAGGCCAAATTGGAGAATATGCTTAAGAAGCTTGACAAGATTATAGAGAAGATTCTAAAGGAGAATCAAGTGTATCAGATGAGAGCAAACAAAGGCATGGGAGAAGAGAAGAACGAAAATCTTGTTGAGGTTCTTTTGCGAGTTTTACACAGTGGCAACCTTGAGACCCCAATTACAACCAACAATGTCAAAGCTGTGATTTGGGACATATTTGCTGCTGGAACTGATACTTCAGCAAAAGTACTAGAGTGGGCTATGGCAGAAATGATGAGAAACCCAAGAGTAAGGGAGAAGGCACAAGCTGAGATTAGACAAACTTTCAGAGGAAAGGAAACAATCCATGAGACTGACCTAGGTGAACTTAGCTACTTAAAGGCTGTAATCAGAGAAACCTTGAGGTTACATCCACCTCTTCCTTTGTTGCTTCCAAGAGAATGCAAGGAAGCATGTGAGATTGGTGGATATGAATTACCTGCTAAGACTAAAGTGATAGTAAACGCATGGGCACTTGGAAGAGATCCTGAGCACTGGTATGATGGAGACAGGTTTATACCAGAAAGATTCCTTGGTACTTGTATTGATTTCAAAGGGACAAACTTTGAATACATCCCTTTTGGGGCAGGAAGGAGAATGTGTCCAGGCATTATATTCGGTTTAGCCAATGTTGAGTTTGCTCTAGCCAAATTACTCTACCACTTCAACTGGGAACTCCCAGAAGGAATGAAGCCAGAGGAGTTTAATATGGATGAAACATTTGGATCTGTGGTTGGAAGGAAAAACAATCTTTACTTGATACCCACTCCTTACAATCCTTCAATTCATGATAATGGCATATGA 1578 0.4024 MEVQSSFIVITSFFFFFFFFFFFFFFFFFSLLILWLVKNYRAKSQHKLPPGPWKLPLIGNLHQLAAASSLPHHALRELAQKYGPLMHLQLGEISAVVVSSPNMAKEIMKTNDLAFAHRPRFLASDIMGYGSVDIAFAPYGDYWRQMRKICTLELLSSKKVQSFSHIREDEAAKLMEIIQSSIGSPINLTNKIDSFISTFVSRAAFGNISEDHEEFILIVKEATQLSDGFDLADLFPSLKPIHLITGLKAKLENMLKKLDKIIEKILKENQVYQMRANKGMGEEKNENLVEVLLRVLHSGNLETPITTNNVKAVIWDIFAAGTDTSAKVLEWAMAEMMRNPRVREKAQAEIRQTFRGKETIHETDLGELSYLKAVIRETLRLHPPLPLLLPRECKEACEIGGYELPAKTKVIVNAWALGRDPEHWYDGDRFIPERFLGTCIDFKGTNFEYIPFGAGRRMCPGIIFGLANVEFALAKLLYHFNWELPEGMKPEEFNMDETFGSVVGRKNNLYLIPTPYNPSIHDNGI. 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00093 525 PANTHER OS08G0105600 PROTEIN 73 518 - -
Seca11g00093 525 CDD CYP71-like 81 509 - -
Seca11g00093 525 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 Coils Coil 244 268 - -
Seca11g00093 525 Pfam Cytochrome P450 49 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Seca11g00093 525 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 FunFam Cytochrome P450 71D8 41 513 - -
Seca11g00093 525 SUPERFAMILY Cytochrome P450 49 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g00093 525 Gene3D Cytochrome P450 40 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00093 Seca-Chr11 1073923 1076261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00093 22 516 Cytochrome P450 AT3G26300 42.604 1.54e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00093 - K15472 gmx:100800554 803.512