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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca11g00076
ATGGCTGAATCTGACAACGAGTCAGGAGGTAACCGCAATGAAGGAGGTGGGTGCAGAGAACAGGACAGGCTTCTTCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCTTTACCAGCGAACGCAAAGATCTCAAAGGAAGCAAAGGAGACTATGCAAGAGTGTGTATCAGAGTTCATCAGTTTCATAACAGGGGAGGCATCTGACAAGTGCCAGAAAGAGAAGAGGAAGACAATCAACGGTGATGATCTTCTATGGGCTATGACCACGCTGGGGTTTGAAGAGTATGTGGAGCCTCTCAAGGTTTACCTCCAAAAGTATAGGGAATTGGAAGGAGAGAAGAATAATGCTATCATTGGGAGTGGGAGGCAGCAGGGTGGTGATGCTTCGTCAATGCCATCATCATCCACTATGATGATGACAGATCACCTTATGTATGCATCTGCTAATGTCTGGAAGAATTAA
465
0.4645
MAESDNESGGNRNEGGGCREQDRLLPIANVSRIMKKALPANAKISKEAKETMQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQKYRELEGEKNNAIIGSGRQQGGDASSMPSSSTMMMTDHLMYASANVWKN.
155
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca11g00076
154
PANTHER
CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
10
124
IPR027113
GO:0001228|GO:0006355|GO:0016602
Seca11g00076
154
Gene3D
Histone, subunit A
14
143
IPR009072
GO:0046982
Seca11g00076
154
MobiDBLite
consensus disorder prediction
1
22
-
-
Seca11g00076
154
SUPERFAMILY
Histone-fold
21
122
IPR009072
GO:0046982
Seca11g00076
154
ProSitePatterns
NF-YB/HAP3 subunit signature.
55
71
IPR003956
GO:0005634|GO:0006355|GO:0043565
Seca11g00076
154
PRINTS
CCAAT-binding transcription factor subunit A signature
52
70
-
-
Seca11g00076
154
PRINTS
CCAAT-binding transcription factor subunit A signature
71
89
-
-
Seca11g00076
154
PRINTS
CCAAT-binding transcription factor subunit A signature
90
108
-
-
Seca11g00076
154
FunFam
Nuclear transcription factor Y subunit B-3
13
138
-
-
Seca11g00076
154
Pfam
Histone-like transcription factor (CBF/NF-Y) and archaeal histone
24
88
IPR003958
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca11g00076
Seca-Chr11
951168
951632
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca11g00076
1
124
CCAAT-HAP3 Transcription Factor Family
AT4G14540
81.600
1.86e-71
210
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YB
Seca11g00076
CBFD_NFYB_HMF
6.5e-28
CL0012
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca11g00076
K08065
-
gmx:100778034
199.519
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