Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00070 ATGGAAGCTCTGTTATGGACACTCAACAACTTGACCAATCACTCTACTATTCTTTATCTCATACATGTATTTCCAGAGATCAAGCACATTCCAAATCCATTGGGAGCAGGGATGATTCCAAGGGATAAAGTGAGTGCTGAGCAGGTGGAGAGTTATGTGGCCGAAGAAAGAGGCAAGAGGAGAGACCTCCTTCAGAAGTTTCTCCAATCATGCTCTACTTCTAAGGTTAAGGCAGACACCATCCTGATTGAGAGTGACTTGGTTGCAAAGGCTATTATTGACCTCATTCCCATTCTTCAAATAAGAAATTTAGTGATCGGAGCCAACAAATTCTATCTAAGAAAATCAAGGTCAAAGAAAGGGAATGGCATAGCTGATCAGGTACTGCAGAATGCACCAGAAAATTGCAAGGTGAGAATTATATGTGAAGGGAAGGAAGTAAATGAGCAGATGCAATTGTTGTCACCCCCTCCACAGCTGCTTACCCCTCGCACCTCTGCTAATGACACTTCCATCACGGAGCATGACGAGTGCTTGCACCACGATTCCGATGAAGAAAGCTCCAGTTGGAGTTGCGGTTTAATTGGGCCCAAGAGGAACCAAGTCTTTGATTCAGAGGAGCTGTTTGAGATCAATCTGAATTTGAAGGAGAAGGAGCCTCCTTTGGATACAATAAGAGAAGAAGACTGCGAGAGCACCGTGTTCTCTCTTGATATTCACAACAAAGATAAAGATGTCGTTTATGTGGCAGTGGGCGACGGTGGAGATTCAAGCATGGAAGCGCTTTCATGGGCCTTGAACCACGCCGTAACACCCTCTACCACCGTTTGCCTCATACACGTTTTCCCTCAAGTCAAGCTCATTCCGAGTCCATTGGGAAAAATTCCAAGGAGCCACGTAAATCTAGAGCATGTTAACATCTACTTGACCCAAGAGAAAGGCAAGAGGAAATTGCTACTTCAAAAGTTCACTGACCTATGCATTGATTCAAAGGTTAAGGTGGAGATGATGCTTATTGAGGGTGACAATGTTGCTAAAGTCATCGTGGACCTTGTCGGGAATCTGAATATAAGGAAATTGGTAATTGGAACCACCAAATCTAATTTAAGAAAATCTGGGCCTAGAAGGCAAAATGCCATAGCGGACATGGTACTAAAAAATACACAAGAAAGCTGTGATATTAAAATCATATGCGAAGGAAGAGAAGTGATCGACCAGATGATTGGCTGCACTTCACAGCGCTCGAAAGACGATAGTAGTTCCAGTTCCAGATCACATGAAGAACATGAATCCCGTTCTTTTGTCCCACTTAAGCGTTTTATGCCCAATCCTTTATGGTTATTTAGGTCCAGATTTTTATGA 1362 0.4317 MEALLWTLNNLTNHSTILYLIHVFPEIKHIPNPLGAGMIPRDKVSAEQVESYVAEERGKRRDLLQKFLQSCSTSKVKADTILIESDLVAKAIIDLIPILQIRNLVIGANKFYLRKSRSKKGNGIADQVLQNAPENCKVRIICEGKEVNEQMQLLSPPPQLLTPRTSANDTSITEHDECLHHDSDEESSSWSCGLIGPKRNQVFDSEELFEINLNLKEKEPPLDTIREEDCESTVFSLDIHNKDKDVVYVAVGDGGDSSMEALSWALNHAVTPSTTVCLIHVFPQVKLIPSPLGKIPRSHVNLEHVNIYLTQEKGKRKLLLQKFTDLCIDSKVKVEMMLIEGDNVAKVIVDLVGNLNIRKLVIGTTKSNLRKSGPRRQNAIADMVLKNTQESCDIKIICEGREVIDQMIGCTSQRSKDDSSSSSRSHEEHESRSFVPLKRFMPNPLWLFRSRFL. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00070 453 Pfam Universal stress protein family 253 377 IPR006016 -
Seca11g00070 453 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 252 368 - -
Seca11g00070 453 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 206 433 - -
Seca11g00070 453 MobiDBLite consensus disorder prediction 419 433 - -
Seca11g00070 453 Gene3D HUPs 247 392 IPR014729 -
Seca11g00070 453 MobiDBLite consensus disorder prediction 411 433 - -
Seca11g00070 453 Gene3D HUPs 1 150 IPR014729 -
Seca11g00070 453 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00070 Seca-Chr11 880836 888559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00070 250 431 Plant U-box Gene Family AT5G57035 30.481 6.15e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00070 - - gmx:100799795 357.836