Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00053 ATGGACATGGACATGGAGGATCGAGATCAAATATCTCCGGCGGGTGCCGTTGGTGTAAGTAATGACGAGAAAGAGCAGCAAGCAGCGGGAGTGGGGATTCTTCTTCAGATCATGATGTTAGGTTTGTCTTTCGTTTTGGGACACGTTCTTCGTCGCAAGAAAATTTACATTCTTCCCGAAGCCAGCGCTTCTCTTCTCATTGGCTTACTCGTTGGTGCACTTGCTGACATTTCTAACACTCAAACCAGCATCAGTCTATCACCGAAACCTTTCTTCTCTAATTTTGGAGCTATTGTCACATTTGCTATATTCGGTACCTTTGTAGCTTCCATTGTAACGGGAATCTTGGTTTATCTAGGTGGTTTGATCTACCTCATGTACAGACTGCCTTTTGTTGAGTGTCTAATGTTTGGTGCTCTTATATCAGCAACTGATCCTGTCACTGTTTTGTCCATTTTTCAGGAGCTTGGCACGGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCCATGGCTATTTCTCTCTACAGGACAATGTCAGTGGTTAAAACTCATCCGTCTGGACAAAATTTCTTCATGGTGGTTGTTGGATTTCTGGAGACTTTCATTGGGTCAATGTCTGCTGGGTTGAATATTGACAAGTACATGCTTGCAGAAGGTCTTGGCCTGTCTGGTATTGTATCAATATTGTTCACGGGAATGGTCATGAAGCATTACACATATTCAAATTTGTCACAAAATTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAGACATTTGTATTTATCTACATGGGCTTTGATATTGCCTTGGAGAAGCATAGCTGGTCACACGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCAGCCAATGTATTCTCTTGTGCTTATCTGGTCAACTTGGTCAGACCTGCACATCAACAAATACCTCCAAAACACCAGAAAGCACTTTGGTATAGTGGTCTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTCACTGCAACAACAGCAATAATTGTTTTGACGGTATTACTAATTGGTGGTTCAACAGGTACCATGCTGGAAGCTTTAGATGTTATAGGTGGTGACAGTCATATTAATGATAGCTCTTTGGCTTCAGTCGGTACCATAACAGTAAGTTTTGCAAGAAAAGGCTCTTATGCTTTCTTAAACAGTGGAAGCATTCCTTCAGTGTTGATTCCACCTGATTGTGGAACTTTTTCCTTGTGGAATATAGCAGGAAGCTAA 1341 0.4139 MDMDMEDRDQISPAGAVGVSNDEKEQQAAGVGILLQIMMLGLSFVLGHVLRRKKIYILPEASASLLIGLLVGALADISNTQTSISLSPKPFFSNFGAIVTFAIFGTFVASIVTGILVYLGGLIYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSVVKTHPSGQNFFMVVVGFLETFIGSMSAGLNIDKYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSQNSQRFVSAFFELISSLAETFVFIYMGFDIALEKHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPAHQQIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIIVLTVLLIGGSTGTMLEALDVIGGDSHINDSSLASVGTITVSFARKGSYAFLNSGSIPSVLIPPDCGTFSLWNIAGS. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00053 446 PRINTS Na+/H+ exchanger signature 138 148 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca11g00053 446 PRINTS Na+/H+ exchanger signature 98 106 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca11g00053 446 PRINTS Na+/H+ exchanger signature 83 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca11g00053 446 MobiDBLite consensus disorder prediction 1 23 - -
Seca11g00053 446 Pfam Sodium/hydrogen exchanger family 220 386 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca11g00053 446 Pfam Sodium/hydrogen exchanger family 84 215 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca11g00053 446 PANTHER SODIUM/HYDROGEN EXCHANGER 22 390 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Seca11g00053 446 Gene3D - 131 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00053 Seca-Chr11 731650 736282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00053 26 388 Antiporters AT3G05030 29.358 3.65e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00053 K14724 - gmx:100781280 627.091