Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00050 ATGGCAAGCCTAAGTGTAGTTGAACAAGATAATAAGCTGAAGCTGTATTCATATTGGAGGAGCTCATGTTCCTTCCGAGTCCGAATTGCTCTCAATCTCAAAGGGCTCAAATATGAGTACAAACCAGTCAATCTGTTGAAGGGAGAAAATTCTCACCCTGAGTTTCTCGAGCTCAACCCTGTTGGTTTTGTCCCCGTTCTGGTGGATGGCCATGCTGTAATTTCTGACTCTTTCGCCATCATTATGTATTTGGAGGATAAGTATCCACACCATCCTTTGCTACCAAGTGATATTCATAAAAGAGCAATCAATTTCCAGGCTGCCAGTATTGTTTCCTCATCAATACAACCTCTTCAAAACCTAAGTTTACTGAATTACATCGAGGAAAAAGTTAGCCCTGATGAAAAACTTCCTTGGGCTCAACGTGTAATTAGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGAACACACAGGAAAATATGCAACTGGAGATGAAGTTTTCCTGGCGGATATATTTTTAGCACCTCAATTATATGCTGCATTTAAGAAATTCAACATTGACAAGAACGAGTTCCCTATTCTATCAAGATTACATGAGACATATTATGCGATCCCAGCATTCCGGGAGGCTTTGCCAGAGAACCAGCCAGATGCAGTACCCTAG 669 0.4096 MASLSVVEQDNKLKLYSYWRSSCSFRVRIALNLKGLKYEYKPVNLLKGENSHPEFLELNPVGFVPVLVDGHAVISDSFAIIMYLEDKYPHHPLLPSDIHKRAINFQAASIVSSSIQPLQNLSLLNYIEEKVSPDEKLPWAQRVIRKGFTALEKLLKEHTGKYATGDEVFLADIFLAPQLYAAFKKFNIDKNEFPILSRLHETYYAIPAFREALPENQPDAVP. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00050 222 Gene3D Glutaredoxin 10 95 - -
Seca11g00050 222 NCBIfam maleylacetoacetate isomerase 14 220 IPR005955 GO:0003824|GO:0005737|GO:0009072
Seca11g00050 222 Gene3D - 96 222 - -
Seca11g00050 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 97 222 IPR010987 -
Seca11g00050 222 CDD GST_N_Zeta 13 85 IPR034333 -
Seca11g00050 222 SFLD Glutathione Transferase (cytosolic) 13 201 IPR040079 -
Seca11g00050 222 Pfam Glutathione S-transferase, C-terminal domain 129 210 IPR004046 -
Seca11g00050 222 SFLD Main (cytGST) 13 201 - -
Seca11g00050 222 CDD GST_C_Zeta 99 217 IPR034330 -
Seca11g00050 222 FunFam Maleylacetoacetate isomerase 96 222 - -
Seca11g00050 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 11 92 IPR004045 -
Seca11g00050 222 PANTHER MALEYLACETOACETATE ISOMERASE 13 220 - -
Seca11g00050 222 Pfam Glutathione S-transferase, N-terminal domain 15 90 IPR004045 -
Seca11g00050 222 SUPERFAMILY GST C-terminal domain-like 92 220 IPR036282 -
Seca11g00050 222 FunFam Glutathione S-transferase Z1 11 95 - -
Seca11g00050 222 SUPERFAMILY Thioredoxin-like 11 95 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00050 Seca-Chr11 717180 720696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00050 12 220 Glutathione S-transferase Gene Family AT2G02380 64.593 8.28e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00050 K01800 - gmx:547590 364.385