Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g00050 | ATGGCAAGCCTAAGTGTAGTTGAACAAGATAATAAGCTGAAGCTGTATTCATATTGGAGGAGCTCATGTTCCTTCCGAGTCCGAATTGCTCTCAATCTCAAAGGGCTCAAATATGAGTACAAACCAGTCAATCTGTTGAAGGGAGAAAATTCTCACCCTGAGTTTCTCGAGCTCAACCCTGTTGGTTTTGTCCCCGTTCTGGTGGATGGCCATGCTGTAATTTCTGACTCTTTCGCCATCATTATGTATTTGGAGGATAAGTATCCACACCATCCTTTGCTACCAAGTGATATTCATAAAAGAGCAATCAATTTCCAGGCTGCCAGTATTGTTTCCTCATCAATACAACCTCTTCAAAACCTAAGTTTACTGAATTACATCGAGGAAAAAGTTAGCCCTGATGAAAAACTTCCTTGGGCTCAACGTGTAATTAGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGAACACACAGGAAAATATGCAACTGGAGATGAAGTTTTCCTGGCGGATATATTTTTAGCACCTCAATTATATGCTGCATTTAAGAAATTCAACATTGACAAGAACGAGTTCCCTATTCTATCAAGATTACATGAGACATATTATGCGATCCCAGCATTCCGGGAGGCTTTGCCAGAGAACCAGCCAGATGCAGTACCCTAG | 669 | 0.4096 | MASLSVVEQDNKLKLYSYWRSSCSFRVRIALNLKGLKYEYKPVNLLKGENSHPEFLELNPVGFVPVLVDGHAVISDSFAIIMYLEDKYPHHPLLPSDIHKRAINFQAASIVSSSIQPLQNLSLLNYIEEKVSPDEKLPWAQRVIRKGFTALEKLLKEHTGKYATGDEVFLADIFLAPQLYAAFKKFNIDKNEFPILSRLHETYYAIPAFREALPENQPDAVP. | 223 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g00050 | 222 | Gene3D | Glutaredoxin | 10 | 95 | - | - | |
Seca11g00050 | 222 | NCBIfam | maleylacetoacetate isomerase | 14 | 220 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 | |
Seca11g00050 | 222 | Gene3D | - | 96 | 222 | - | - | |
Seca11g00050 | 222 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 97 | 222 | IPR010987 | - | |
Seca11g00050 | 222 | CDD | GST_N_Zeta | 13 | 85 | IPR034333 | - | |
Seca11g00050 | 222 | SFLD | Glutathione Transferase (cytosolic) | 13 | 201 | IPR040079 | - | |
Seca11g00050 | 222 | Pfam | Glutathione S-transferase, C-terminal domain | 129 | 210 | IPR004046 | - | |
Seca11g00050 | 222 | SFLD | Main (cytGST) | 13 | 201 | - | - | |
Seca11g00050 | 222 | CDD | GST_C_Zeta | 99 | 217 | IPR034330 | - | |
Seca11g00050 | 222 | FunFam | Maleylacetoacetate isomerase | 96 | 222 | - | - | |
Seca11g00050 | 222 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 11 | 92 | IPR004045 | - | |
Seca11g00050 | 222 | PANTHER | MALEYLACETOACETATE ISOMERASE | 13 | 220 | - | - | |
Seca11g00050 | 222 | Pfam | Glutathione S-transferase, N-terminal domain | 15 | 90 | IPR004045 | - | |
Seca11g00050 | 222 | SUPERFAMILY | GST C-terminal domain-like | 92 | 220 | IPR036282 | - | |
Seca11g00050 | 222 | FunFam | Glutathione S-transferase Z1 | 11 | 95 | - | - | |
Seca11g00050 | 222 | SUPERFAMILY | Thioredoxin-like | 11 | 95 | IPR036249 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g00050 | Seca-Chr11 | 717180 | 720696 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g00050 | 12 | 220 | Glutathione S-transferase Gene Family | AT2G02380 | 64.593 | 8.28e-100 | 287 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g00050 | K01800 | - | gmx:547590 | 364.385 |