Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00049 ATGGCAACTGGTGAAAACAATCTGAAGCTATATTCTCACTGGATGAGCTCTTGTTCCTTCCGTGTTCGATTTGCTCTCAACCTCAAAGGTCTGAAATATGAGTACGAAGCATGCAATCTCCAACGAATTTCTGACCCCGAGTTTCAGAAGCTCAATCCTGTTGGGTATGTTCCCGTGCTGGTGGATGGTGATGTAGTAATTGTTGACTCTTTTGCCATTATTATGTATTTGGAAGATAAGTATCCTCACCATCCTCTGCTGCCTCATGATATTCATAAAAGAGCAATCAATTTCCAGGTTGCCAATATTGTTTCCTCAGCTATACAGCCTTTTCAAAACTTCACTGTAGCGAAGTACACTGAGGAAAAGGTTGGCCCAGATGAAAAACTTCCTTGGACCCAGAGTGTAATCGGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGACCATGCAAGAAGATATGCAACTGGAGATGAAATTTTCCTGGTATGTTGTGAATCCATGGATTCAATAGGAACAAATGAGCTCGTTTCCAGGGTACAGTAG 549 0.4171 MATGENNLKLYSHWMSSCSFRVRFALNLKGLKYEYEACNLQRISDPEFQKLNPVGYVPVLVDGDVVIVDSFAIIMYLEDKYPHHPLLPHDIHKRAINFQVANIVSSAIQPFQNFTVAKYTEEKVGPDEKLPWTQSVIGKGFTALEKLLKDHARRYATGDEIFLVCCESMDSIGTNELVSRVQ. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00049 182 SFLD Glutathione Transferase (cytosolic) 8 161 IPR040079 -
Seca11g00049 182 Gene3D - 89 169 - -
Seca11g00049 182 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Seca11g00049 182 NCBIfam maleylacetoacetate isomerase 9 165 IPR005955 GO:0003824|GO:0005737|GO:0009072
Seca11g00049 182 SUPERFAMILY Thioredoxin-like 6 88 IPR036249 -
Seca11g00049 182 SFLD Main (cytGST) 8 161 - -
Seca11g00049 182 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 182 IPR010987 -
Seca11g00049 182 Gene3D Glutaredoxin 5 88 - -
Seca11g00049 182 SUPERFAMILY GST C-terminal domain-like 85 161 IPR036282 -
Seca11g00049 182 FunFam Zeta class glutathione transferase GSTZ1 6 87 - -
Seca11g00049 182 Pfam Glutathione S-transferase, N-terminal domain 11 83 IPR004045 -
Seca11g00049 182 PANTHER MALEYLACETOACETATE ISOMERASE 8 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00049 Seca-Chr11 711042 715909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00049 5 164 Glutathione S-transferase Gene Family AT2G02380 59.877 2.89e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00049 K01800 - gmx:100526991 233.417