Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05487 ATGATGCTTCTTCTTGTTGTAGTTGTAGTAGCTATCTTTGTTTTGTATTTGGTGAAAGATTTGAACTCAATTTTCTGGGTCCCATGGAAAATCCAGTGCCACTTTGTGAAGCAAGGGATAAGAGGCCCTGGCTACCGTCCGATCTTTGGGAACTCCTCTGAGATCCGACGGCTCTATGCAGCAGAAGCTAAATCAGATGCAAACTTTCCTTTTGACCACGACATCTTGAAACGTGTGCTTCCATTCTACCACAGGTGGAGTTGCATGTATGGGAAAACTTTCCTCTACTGGTTTGGGTCAACGCCCCGTTTGGCTATATCTGACCCTGAAATGATCAAGGAAGTGTTGGTGAATAAGAGTGGTGAATATGGGAAAGTTCCCTATAATCCACAATCCAAGTTGCTTTTTGGACAAGGACTTGTGGGGTTGCAGGGTCATCAATGGTTGTTTCACAGAAGGATAATAAACCAGGCCTTCAACATGGAGCTTGTTAAGGTCTGTGAGATGGGATGGGTGCCGGATATTGTGGCTAGTGTGACAAAGATGATGGAGAAATGGGAAGATGAAAGAGGAGGAAGAGATGAAGTTGAGATTGATGTACACAGAGAGCTTCATGATCTTTCTGCTGATGTTATATCAAGGACTGCTTTTGGCAGCAGTTATGAAGAGGGCAAGCATATTTTCAACTTACAGGAGCAGCAAATGCATCTTTTCTCACAGGCTGTTAGAAGTGTCTATATCCCTGGATTTAGATATTTGCCAACTAAGAAGAATAGGGATAGGTGGAGACTAGATAAAGAAACACGTGAGGCAATTCGCAAGCTGATTGAGACCAAGAGCAATGAAAAGGAAAATGCAAGAAATGTACTAAGTTCATTGATGTGTTCCTACAAGAATGAAGTTGGTGGAGAAGACAAGTTAGGGGTGGAAGAAATTATAGATGAATGTAAAACCATCTACTTTGCTGGAAAGGAAACAACAGCTAATTTGTTGACTTGGGCACTTCTTCTATTAGCAAAACATCAAGAATGGCAAAGTAAAGCACGTGAAGAAGTTCTTCATGTCATTGGACACAATCGACTTCCGGTTACAGACAATTTAAATGACCTTAAGATTGTCAGCATGATAATCAATGAAACTCTTAGGCTCTATCCTCCAGCTGCAATGATGATGAGGCAAACCTCTGAAAATGTGATGTTAGGAAGCATTGAAGTCCCTGCTAAGACTCAACTCTACTTGGCATTGACTGCTGTCCATCATGACAGAGAAATCTGGGGAGAAGATTGTCATGAGTTTAATCCAACAAGATTCAGTGAGCCTCGAAAGCATTTAGCCGCGTTCTTACCTTTTGGATTAGGTCCTAGAACCTGTGTTGGGCAAAATTTGGCAATGGTTGAGGCAAAGATTTCTCTTGCTTTGATCATTCAAAGATATAGTTTTGTAGTATCACCAAGCTATAGGCATGCTCCTATACTGTTTATAACTTTGCAGCCTCAATATGGTGCACAAATCCTCTTCAGAAAGATTTCATATTGA 1536 0.4128 MMLLLVVVVVAIFVLYLVKDLNSIFWVPWKIQCHFVKQGIRGPGYRPIFGNSSEIRRLYAAEAKSDANFPFDHDILKRVLPFYHRWSCMYGKTFLYWFGSTPRLAISDPEMIKEVLVNKSGEYGKVPYNPQSKLLFGQGLVGLQGHQWLFHRRIINQAFNMELVKVCEMGWVPDIVASVTKMMEKWEDERGGRDEVEIDVHRELHDLSADVISRTAFGSSYEEGKHIFNLQEQQMHLFSQAVRSVYIPGFRYLPTKKNRDRWRLDKETREAIRKLIETKSNEKENARNVLSSLMCSYKNEVGGEDKLGVEEIIDECKTIYFAGKETTANLLTWALLLLAKHQEWQSKAREEVLHVIGHNRLPVTDNLNDLKIVSMIINETLRLYPPAAMMMRQTSENVMLGSIEVPAKTQLYLALTAVHHDREIWGEDCHEFNPTRFSEPRKHLAAFLPFGLGPRTCVGQNLAMVEAKISLALIIQRYSFVVSPSYRHAPILFITLQPQYGAQILFRKISY. 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05487 511 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 502 - -
Seca10g05487 511 Pfam Cytochrome P450 82 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 FunFam Cytochrome P450 734A1 25 510 - -
Seca10g05487 511 Gene3D Cytochrome P450 36 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 Coils Coil 269 289 - -
Seca10g05487 511 SUPERFAMILY Cytochrome P450 74 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05487 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05487 Seca-Chr10 124089109 124092470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05487 23 510 Cytochrome P450 AT1G75130 56.237 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05487 - - mtr:11418505 836.254