Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05399 ATGCTTGCCTTTGCAGCAATAATTGCATCCCTTCTCTACTTCCTATTCTTCTTCCATCGCAAACATTGCAAATATCCTCTCATGACACACTACCCTCTCCTTGGCATGTTACCACAAATCCTTTGGAACTCATGGCGGATCCATGATTTCTTGACTGAGTCATTGAAACGACACGGTGGCACTGGTGAGTTCATGGGACCTTGGTTTACCAAAATGAACTATATGATCACTAGTGACCCCATCAATGTACACCACATCATGAGCAAGAGTTTTGATAACTATGTTAAAGGCCCTGAGTTTCGTGAGATTTTCCAAGAAGCCTTTGGAGATGGGATATTCACTGCCGATTCAGACACATGGAAATACAACAGGTCTCTCCTCCATTCTTTGTTTAAACAAAGAAGCTTCCAGATGTTTCTAGAGAAAACCATTCAAAACAAGGTGGAGACCAAGCTACTTCCAATATTAGATAATAATGATCATGTGATGGTGGTGGATCTTCAAGATGTCTTTTGTCGATTCACATTTGATAACATATGTTCCATAGTTATGGGACATGATCCTAATTGCCTTTCCATTGATTTCCCACAAGTTGCATGTGAGAAGGCTTTCAATGAAGCTGAAGAATCCATATTCTATAGACACATAGTGCCAAAATGTGTGTGGAAGTTGCAAAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGGTTGAAGCATGTGAAACATTTGACCAATTCTTATATGCATGTATAGAGTCTAAGAGAGAAGAGCTAAAAATGGGTGAAACTCTCCTTAAGCAAGATCTCGGGTTCGAGTTTTTAAAAAAATCCGTGCCGAGAGAATTAGCCCAACCAGAATGTGGATATCCCAGACTCGAGCAGAATTGTCTACGGGTTCATACCAAAAATATGGGTGAAAGTCAAGTTGACTTGCTAACATCTTTGATGAGAGAACAAGTCCATGATGATGACAAGTTTCTAAGGGATGTTGCATTTAATCTTTTTGTGGCAGGGAGAGATACCATAGCTTCAGCTCTTACATGGTTCTTTTGGCTTGTTGCTACAAATCCATTAGTGGAAGCCAAGATTCTTGAAGAGATGAAAGATGATAATTTGGTGGCTAATAATAATAAGAAAGGGGTTTTATGCATGGAGGAGATGAAAAATTTAGTGTATCTCCATGGTGCTATATGTGAAGCTTTGAGGCTTTTTCCACCTATACCTATTGAGCGCAAGCAAGCAATCAAAGCTGACATACTTCCCAGTGGTCACCGTATTGATCCTAATACGGTGATATTGTTTTCTTTGTATGCAATGGGGAGATCTGAAGAAATTTGGGGAAAAGATTGTTTGGAATTTAAGCCTGAGAGATGGATCTCTGAGAGAGGAAGCATTGTTTATGTGCCATCTTACAAATTCATTAGTTTTAATGCAGGGCCTAGGACTTGCTTGGGAAAGGACTTATCCTTCATTCAAATGAAGATGGTTGCAACCTCTATTTTGCTCAACTATCGTGTTCAATTGGTGGAAGGTCATGCTCCTAACCCGAGCCTTTCAATTGTTCTTCTCATGAAGCATGGTTTGAAGGTTAGGATGAGAAAAAGAGAAATTTAA 1614 0.3953 MLAFAAIIASLLYFLFFFHRKHCKYPLMTHYPLLGMLPQILWNSWRIHDFLTESLKRHGGTGEFMGPWFTKMNYMITSDPINVHHIMSKSFDNYVKGPEFREIFQEAFGDGIFTADSDTWKYNRSLLHSLFKQRSFQMFLEKTIQNKVETKLLPILDNNDHVMVVDLQDVFCRFTFDNICSIVMGHDPNCLSIDFPQVACEKAFNEAEESIFYRHIVPKCVWKLQKWLQIGQEKKMVEACETFDQFLYACIESKREELKMGETLLKQDLGFEFLKKSVPRELAQPECGYPRLEQNCLRVHTKNMGESQVDLLTSLMREQVHDDDKFLRDVAFNLFVAGRDTIASALTWFFWLVATNPLVEAKILEEMKDDNLVANNNKKGVLCMEEMKNLVYLHGAICEALRLFPPIPIERKQAIKADILPSGHRIDPNTVILFSLYAMGRSEEIWGKDCLEFKPERWISERGSIVYVPSYKFISFNAGPRTCLGKDLSFIQMKMVATSILLNYRVQLVEGHAPNPSLSIVLLMKHGLKVRMRKREI. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05399 537 PANTHER CYTOCHROME P450 19 530 - -
Seca10g05399 537 CDD CYP86A 63 528 - -
Seca10g05399 537 SUPERFAMILY Cytochrome P450 28 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Seca10g05399 537 Pfam Cytochrome P450 29 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05399 537 Gene3D Cytochrome P450 19 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05399 Seca-Chr10 122754148 122755761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05399 1 536 Cytochrome P450 AT2G23180 44.732 4.70e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05399 - - gmx:100779590 725.702