Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05384 ATGAATCCCTTACCAAATGAAAGGGAAGAAGATTGGCTTGGTGCCCTTCTGAGGATCAAGATTGGCAATTGTGAAGAACACCAAGACCTTAAGTTCAATGAGAAGAATGTGTTCTGTGTAGACTGTGCAGTTAGCTTTTGTAGGTACTGTAAGGAAGCTCATTCCCTCCATCGAAGATTTCAGATATACAAATATTGCTATCATGATGTTGTTCGCCATTCTGATCTACACAAGTATTTTGACTGCTCAAATATTCAAACTTATATATCCAATAATGACAAGATTGTGCATCTCAAACCCCGGCCATCATCCAAAGATATCAAACTAGCAAAAAGATCTAAAGCTGCTAATAGAAGCCCTGAGTCTCAAGCCAAAGAAACCAAAACATCAACACCTCCAAAATGGGGTGGTTCTTGTGAAGAATGTGGAAGACATTTACAAGATAACCGTAATAGATTCTGCTCCATCACATGCAAGGTAACAAGAATTTCAGTGGAGCCCCAAAACCAAGGAATTGAAGAAAATTCTGTAGAGAAAAATCATTCTTCACAAAGGATTTCAGAGGAGCCTGTCAACCAAAATGACAACCAAATCTCAGAAACAGAGATATCATCTATCACTGTAGTAGCTGAGCCATATGAATGTGTTGAAAAAGTGAATTTCAGAAAGCGCCCAAGGAAATCCACCCCTCACAGAGCTCCCTTTTTTTGA 711 0.391 MNPLPNEREEDWLGALLRIKIGNCEEHQDLKFNEKNVFCVDCAVSFCRYCKEAHSLHRRFQIYKYCYHDVVRHSDLHKYFDCSNIQTYISNNDKIVHLKPRPSSKDIKLAKRSKAANRSPESQAKETKTSTPPKWGGSCEECGRHLQDNRNRFCSITCKVTRISVEPQNQGIEENSVEKNHSSQRISEEPVNQNDNQISETEISSITVVAEPYECVEKVNFRKRPRKSTPHRAPFF. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05384 236 MobiDBLite consensus disorder prediction 99 136 - -
Seca10g05384 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 235 - -
Seca10g05384 236 MobiDBLite consensus disorder prediction 169 198 - -
Seca10g05384 236 ProSiteProfiles Zinc finger B-box type profile. 19 62 IPR000315 GO:0008270
Seca10g05384 236 MobiDBLite consensus disorder prediction 99 121 - -
Seca10g05384 236 Pfam PLATZ transcription factor 64 160 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05384 Seca-Chr10 122380734 122382760 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca10g05384 PLATZ 4.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05384 - - gmx:100820425 311.997