Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g05383 | ATGGCCCTCTCTTTCTCTTTCACCACCCACACCCATTTCTTCTTCTTCTTCTTCTTGTTCTTCCTCTGCAACCTTCAACCTTCACTTGCTCAACAACTCAAATCCTTCAACATCTCACTCTCTCCATGGCTCCCTTCACAGAACAGAACCCTTATCTCCCCCAATTCCAATTTCACTGCTGGCTTCCTTCCCATGCCCAATTCCCCAAACAACTTCACCTTCTCTGTTTGGTTCTCCAAAGTCCCCAAAAATGCAAACCCTGTTGTATGGAACGCCACCACAACCTCTTCCCAAACCCAATTCATCATCACCTCAAAAGGGGAGCTTTTTCTCCATGGCTCCCCCATCGGTGTCAATGCTTCTGCCTCTTCCAATTCCACACAACTCCGCCTTCTTGACAATGGAAACTTAGTCTTGGGAACTTGGAGCAGCTTTGCAGATCCAACCAACACCATCTTGCCCAACCAAAGCATCAGTGGGATCATCCTTCGTTCTAATAATAGGAAATTCAAGTTTGTTAAGTCTCAGTGTTTGGCTCTCCAAGAGAATTCCACTTGTGACTCTGATGACAAGTACTATAACACCCCAAATGCTTTATTGAGCATGGACAATGATGGGAAAATGAGCATGGTAGGTAACTCTTTTCTTACCTCTGATTATGGTGACCCCAGGTTCAGAAAATTGGTTCTTGATGATGATGGGAATCTCAGAATCTACAGCTTCTACCCTGAGCAGCAGAATCAGTGGGTTGAGGTTTGGACAGCAATTTGGGATCTTTGCACAATCAAAGGAAAATGTGGTCCTTATGCTATCTGTGTGCCAAGAGAAGATTTGTATAATGTAACTGATTGTTTTTGCCCATCTGGGTTCAAGCCACTTCCAGGTGGGGCTGAGAAAGGTTGCACAAGAAAGATTCAACTTTCAAGCAACATTGATTTCCTCAGGCTAGACTATGTAAACTACACCAGCAATGGTGTGCTGAATCCAATCAATGCTGGGAATTTCACAACTTGTGAATCCAGCTGTAGAAAAGACCCAAAATGTCTTGGGTTTGGCTTCAAGTATGATGGATCAGGCTATTGTGTTTTGCTACCAGGAACACAGCTTCAATATGGTCACTGGTCACCAGGAACTGAAACTGCCTTCTTTCTGAGAGTTGACAAATCTGAAACAGAACCCCCCAATTTCATTGGGTTGACCCAAGTGATGCAAACAACATGCCCTGTTAACATAAGTCTTCCACTTCCACCTAAGGACTCAAACACCACCACCAGAAACATTGTCATAATATGCACCCTTTTTGCTGCAGAACTCATAGCTGGGGTGGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTACAGAGACATGGCTACCACATTAGGCCTTGAGCTTTTACCTGCTGGTGGCCCCAAAAGGTTCACATACTCAGAGATCAAAGCTGCTACCAATGACTTTTCCAACCTCATAGGGAAAGGTGGCTTTGGAGATGTCTACAAAGGGGAGTTGCCTGACCACCGTGTGGTTGCCGTGAAGTGCCTCAAGGATGTCACCGGCGGTGATGCTGAGTTTTGGGCAGAGGTCACTATCATTGCCAGGATGCACCATCTCAACTTGGTTCGTTTGTGGGGTTTCTGTGCTGAGAAAGGTAAAAGGATACTTGTCTATGAGTACATCCCTGGTGGCTCATTGGACAAGTATTTGTTCCGGGCCAAGTCTTCAAAGCCCAACTCAAACACAAACCCAAGCCCAAGCCCAAACACCCAAGATAAGCCCATTTTGGATTGGAGCATGAGGTACAGGATTGGACTTGGTGTGGCCCGGGCTATTGCATACTTGCATGAGGAGTGTTTGGAATGGGTTCTGCATTGTGATATAAAGCCTGAGAACATTCTGTTAGGTGATGATTTTTGTCCCAAGATATCAGATTTTGGGTTGGCAAAACTGAGGAAAAAGGAGGATATGGTGACTATGTCTAGGAGGAGAGGAACTCCTGGTTATATGGCTCCTGAATGGATCACTGCAGATCCAATAACTTCTAAGGCTGATGTGTATAGTTTTGGGATGGTACTATTGGAGCTTGTGAGTGGGGTGAGGAACTTTGAGGTCCAAAGTTCTGAGGTAAGAAGTGAGGAGTGGTATTTCCCAGGATGGGCTTTTGATAAGATGTTTAAGGAGATGAATGTGGATGACATTTTGGATAGTAAGATTAGGGAAGTTTATGATAGTAGGGCACATTTTGAATTGGTTAATAGAATGGTGAAGACAGCAATGTGGTGCCTGCAGGATAGGCCTGAGATGAGGCCTACAATGGGAAAGGTGGCTAAGATGTTGGAAGGGACTGTGGAGATCATTGAGCCCAAGAAGCCCACTGTTTTCTTCCTTGAAGGAGAGTAA | 2400 | 0.4504 | MALSFSFTTHTHFFFFFFLFFLCNLQPSLAQQLKSFNISLSPWLPSQNRTLISPNSNFTAGFLPMPNSPNNFTFSVWFSKVPKNANPVVWNATTTSSQTQFIITSKGELFLHGSPIGVNASASSNSTQLRLLDNGNLVLGTWSSFADPTNTILPNQSISGIILRSNNRKFKFVKSQCLALQENSTCDSDDKYYNTPNALLSMDNDGKMSMVGNSFLTSDYGDPRFRKLVLDDDGNLRIYSFYPEQQNQWVEVWTAIWDLCTIKGKCGPYAICVPREDLYNVTDCFCPSGFKPLPGGAEKGCTRKIQLSSNIDFLRLDYVNYTSNGVLNPINAGNFTTCESSCRKDPKCLGFGFKYDGSGYCVLLPGTQLQYGHWSPGTETAFFLRVDKSETEPPNFIGLTQVMQTTCPVNISLPLPPKDSNTTTRNIVIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATNDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKDVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGKRILVYEYIPGGSLDKYLFRAKSSKPNSNTNPSPSPNTQDKPILDWSMRYRIGLGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFEVQSSEVRSEEWYFPGWAFDKMFKEMNVDDILDSKIREVYDSRAHFELVNRMVKTAMWCLQDRPEMRPTMGKVAKMLEGTVEIIEPKKPTVFFLEGE. | 800 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g05383 | 799 | Gene3D | Transferase(Phosphotransferase) domain 1 | 560 | 790 | - | - | |
Seca10g05383 | 799 | SMART | serkin_6 | 485 | 779 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g05383 | 799 | Gene3D | - | 42 | 153 | IPR036426 | - | |
Seca10g05383 | 799 | MobiDBLite | consensus disorder prediction | 574 | 593 | - | - | |
Seca10g05383 | 799 | FunFam | S-receptor-like serine/threonine-protein kinase | 457 | 559 | - | - | |
Seca10g05383 | 799 | Pfam | S-locus glycoprotein domain | 222 | 292 | IPR000858 | GO:0048544 | |
Seca10g05383 | 799 | Gene3D | Phosphorylase Kinase; domain 1 | 459 | 559 | - | - | |
Seca10g05383 | 799 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 88 | 158 | IPR036426 | - | |
Seca10g05383 | 799 | ProSiteProfiles | PAN/Apple domain profile. | 301 | 387 | IPR003609 | - | |
Seca10g05383 | 799 | ProSiteProfiles | Protein kinase domain profile. | 485 | 783 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g05383 | 799 | SUPERFAMILY | Protein kinase-like (PK-like) | 468 | 780 | IPR011009 | - | |
Seca10g05383 | 799 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 622 | 634 | IPR008271 | GO:0004672|GO:0006468 | |
Seca10g05383 | 799 | FunFam | Serine/threonine-protein kinase | 560 | 790 | - | - | |
Seca10g05383 | 799 | PIRSF | SRK | 6 | 799 | IPR024171 | GO:0004674 | |
Seca10g05383 | 799 | PANTHER | OS07G0415500 PROTEIN | 11 | 794 | - | - | |
Seca10g05383 | 799 | SMART | blect_4 | 46 | 148 | IPR001480 | - | |
Seca10g05383 | 799 | CDD | STKc_IRAK | 491 | 781 | - | - | |
Seca10g05383 | 799 | ProSitePatterns | Protein kinases ATP-binding region signature. | 491 | 513 | IPR017441 | GO:0005524 | |
Seca10g05383 | 799 | Pfam | Protein kinase domain | 489 | 776 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g05383 | Seca-Chr10 | 122370333 | 122372780 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g05383 | 319 | 791 | Receptor kinase-like Gene Family | AT4G18250 | 33.809 | 5.34e-78 | 264 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Seca10g05383 | Pkinase | 6.9e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g05383 | - | - | gmx:100775518 | 1235.71 |