Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05364 ATGGTGACTCCAAACTTGAACCTGGAATCTGAAAACAATATAGAAGTCAGCAGCCAAGTAGGTTGCAATATATCCTCTCAAGAAACATCCCATGATCTTCTTACCAAGAACAGCACAACCACTTCTTTCTATCTTACAAATCTCACTGAGACTGATCCTGATCCTGATCCTGATCCAGATCCAGGTTCTGTTTCCCTTGACTTGACCCTCAACTTCAATCCCAATGATGAAGAGTTGAAGGATACAAGTGACACTAACAGTGAGGCTCATGCTTCGGCACCAGCCATTCATCGAGTTTTCTCTTGTAATTATTGTAGGAGGAAATTCTTTAGCTCACAGGCATTAGGTGGCCATCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAACGTGCAATGAGAATGGGAATTTTCACTGAAAGGTATACAAGCCTAGCATCTCTACCTCTTCATGGTTCTAATTTTAGGTCTCTTGGTGTTGAAGCTCATGCTGCAATGCACCAAAGACACATGCCATCATCATCACTGAGGGCTCCTGATATGAGAGCTGCAGCAAAATTTGAGAAAGATCACTGTTTTGGAACACCAATCTTCATGCAAGATGATGATGTTGGTCTATTTTGGCCTGGCAGTTTCAGGCAGGTAGATAAAATGGGGCATGAACATGCTCATAATTCAAATACTAGTTTTGTAGTAAGGCCACCTCCTGCACAAACATCTACATCTCCTGATCTCACTCTGAGGCTTTAA 750 0.4227 MVTPNLNLESENNIEVSSQVGCNISSQETSHDLLTKNSTTTSFYLTNLTETDPDPDPDPDPGSVSLDLTLNFNPNDEELKDTSDTNSEAHASAPAIHRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGIFTERYTSLASLPLHGSNFRSLGVEAHAAMHQRHMPSSSLRAPDMRAAAKFEKDHCFGTPIFMQDDDVGLFWPGSFRQVDKMGHEHAHNSNTSFVVRPPPAQTSTSPDLTLRL. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05364 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Seca10g05364 249 PANTHER ZINC FINGER PROTEIN 4-LIKE 64 220 - -
Seca10g05364 249 MobiDBLite consensus disorder prediction 226 249 - -
Seca10g05364 249 SUPERFAMILY beta-beta-alpha zinc fingers 98 128 IPR036236 -
Seca10g05364 249 FunFam Zinc finger protein 2 76 146 - -
Seca10g05364 249 MobiDBLite consensus disorder prediction 46 92 - -
Seca10g05364 249 Gene3D Classic Zinc Finger 79 146 - -
Seca10g05364 249 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05364 Seca-Chr10 122118167 122118916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05364 98 249 C2H2 Transcription Factor Family AT1G66140 44.505 8.29e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05364 - - gmx:100777133 346.665