Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05346 ATGAAGAGACTTAGATTGCTTCAACTTGGTCATGTAAAACTTACTGGAGATTTTGAGTATTTATCAAAAGACTTGCGTTGGCTCTGTTGGCATGGATTTCCTTTAAGATACATCCCTCGGAACTTTTATCTGAACAAATTAGTTGCTATGGACTTAAAGCACAATAATCTACCATTAGTCTGGAAGGAGCCACAGTTGAAAATCCTCAATCTGAGTCATTCCCATGACTTGACACGAACCCCTGACTTTTCAAGACTGCCAAATCTTGAAAAGCTAATTCTTAAAGATTATCCAAAATTGTCAGAGGTTCACTTAACAATTGGAGATCTCAAATTTATTATTCTGGTAAATTTGAAGGACTGTATATCCCTCTGTCACCTCCCAAGAAGTATCTATAACACTGCTATCACTCAAGTGCCTAATTCTCTAGTGATATCAAAAAGCATCAGATATGTGTCTCTATGTGGCTATGAAGGATTATCGCGTCATGTATTTACTTCACTGATTTTGTCTTCAATGTCACCATCAAGTAATCCTACGTATAAAGTTTTTGGGCACATTACATCTTCACTCCAAAGTCTTTCACTTGATTTATCTGCCAAAAATCATGCCGAATTGGAATCAAGACCAAGCACATCTCATATGACATATGCAGAGACTTCCACATTAATTGATCTTCAGAACTCCGTTCACATTGCAGGGTCTGGAAATTTCACTTGTTCTCTTGTTATTCAAGCTGGAGAATGCAGCAAAGCCACTGATACTTTTACAAAGAGTGAAGGTTCCTCTGTATTGTTTAAAGTGCCTAATAGTGGTAACAAGTTGAAAGGAATGACTTTACACATCATTTATTCATCTTCGCTTGTCAACCTGGCTCCTGAGTGTGTTCTTCTTAGTATCCTGATAATGAATTACACAAAGAACACCACTCTGTCCTATAAGCGGGACACAACAACTTCTCTCAAAGATGAAGAGTGGCAAGGATTGATATCAAATCTTGAACCTGGTGATGAAGTGGAGATTGTTATAGTTTTGGGACATCGATTTACTGTGAAGAAGACAGTAGCCCATCTAATATTTGATGAAATGACCGATGCCAAAATTATGGAGTGTTCATTAGTTCCACACAATTCTCAAATTTGA 1143 0.3736 MKRLRLLQLGHVKLTGDFEYLSKDLRWLCWHGFPLRYIPRNFYLNKLVAMDLKHNNLPLVWKEPQLKILNLSHSHDLTRTPDFSRLPNLEKLILKDYPKLSEVHLTIGDLKFIILVNLKDCISLCHLPRSIYNTAITQVPNSLVISKSIRYVSLCGYEGLSRHVFTSLILSSMSPSSNPTYKVFGHITSSLQSLSLDLSAKNHAELESRPSTSHMTYAETSTLIDLQNSVHIAGSGNFTCSLVIQAGECSKATDTFTKSEGSSVLFKVPNSGNKLKGMTLHIIYSSSLVNLAPECVLLSILIMNYTKNTTLSYKRDTTTSLKDEEWQGLISNLEPGDEVEIVIVLGHRFTVKKTVAHLIFDEMTDAKIMECSLVPHNSQI. 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05346 380 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 212 IPR044974 GO:0006952
Seca10g05346 380 Gene3D Ribonuclease Inhibitor 1 139 IPR032675 -
Seca10g05346 380 SUPERFAMILY L domain-like 3 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05346 Seca-Chr10 121840408 121842398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05346 14 144 WRKY Transcription Factor Family AT5G45050 28.671 1.52e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05346 - - lja:Lj0g3v0000209.1 452.21