Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05318 ATGGCTCACCATTATTCAAACAAGGCCTTAGGTTGCTTTCTCTTGTTTTCTATTTTTGTGTCTTCTCTTTCAACTTTTTCTCATGCTCATTTTGGATTCATTATGGATCCAAGAGAAAGAATATCACTCCCATTCCCAGAAGATGGTGGTGATGCTCCTGTACCAGCACCAGAATCCGAAGTTGAGCCAAGAGAAGAAAGGCTAAAAAACGCCCATGTTGCTCTCCAAGCATTGAAAGAGGCTATTTACTCTGACCCTTTCAATGTAACTGGTAATTGGGTTGGTAATGATGTTTGCTCCTACAATGGTGTGTTTTGTGCCCCTGCACTTGATGATTCCTCATTGGATGTGGTTGCTGGTGTTGATCTTAACCAAGCAGACATTGCTGGCCACCTCCCTGAAGAATTGGGTCTCTTGAAAGATGTTGCACTTTTCCACATTAACTCCAATAGATTTTGTGGAATTGTCCCACAGAGCTTAGAGAATCTCACTCTTATCCATGAGTTTGATATCAGCAACAACCGTTTTGTTGGTGGTTTCCCTTCTGTGGTCCTCAATTGGCCAAACTTGAAGTACTTGGATATCAGATTCAATGACTTTGAAGGAGCTTTACCTCCTGAGCTATTTCAGAAAGAACTTGATGCAATATTTTTGAACAACAACCGTTTCACATCTCTTATCCCAGAAACTCTAGGAAACTCCACAGCCTCAGTTGTGACCTTTGCTAACAATCATTTCTCAGGTTGCATTCCAAAATCAATAGGGAACATGGTGAACTTGAATGAGATTGTCTTCATAGGCAATGGCCTTGGTGGTTGCATCCCACAAGAGATTGGAATGATAAAGGATGTGACTGTTTTGGATGCTAGCAATAATGAGTTTGTAGGGACTCTTCCTAACTTGTCAGAATTGAAGAAAGTTGAGGTCATAGACATAGCACACAACAATCTTACTGGATATGTGTCTAACACTATATGCCAGTTACCTTCTTTGAAGAACTTCACATTCTCTGACAATTACTTCAATGGGGAAGCTCAAGCTTGTGTGCCTTCATCCAATTCAGGTGTTGCTTTTGATGACTCAAGCAATTGTTTGCCAGGGAAGAAGAATCAAAAGACATCCAAACAATGTTTTCCAGTGCTAACTCGCCATGTGGATTGTAGCAAGCAATGTGGTGGTGGAGGAAGTGGTAATGACAAAGGGAATAGCAATGTCCCATCAACACCAAAGCCAACTCCTTCACCTTCACCTGTAACAGAACCACCACAGACACCAAAGGCTGAGCCACCTCCAACACCAAAGGCAGAGCCGCCACCAACCCCAAAGGCAGAGTCACCACAAACCCCAAAGGCTGAGCCACCACCAACACCAAAGGCAGAACCACCACCAACACCAAAGGTTGAGCCACCAGCAACACCAAAGGCAGAACCACCACCAACACCAAAGGCAGAGCCACCATCAACACCAAAGGCTGAGCCACCTCAAACACCAAAGGTTGAACCACCTACAGTACACTCTCCTCCACCGCCTGTCCACTCACCTCCACCACCTGTTCACTCTCCTCCACCACCAGTCCACTCACCACCACCACCAGTTCACTCTCCTCCACCCCCTGTGTCCTCACCACCTCCACCAGTTTACTCTCCCCCACCCCCTGTCCACTCACCACCACCACCACCACCAGTTCAATCTCCACCACCACCAGTCCATTCTCCACCTCCACCGGTTTACTCTCCACCACCACCAGCTCATTCTCCACCTCCACCAGTTTACTCTCCACCACCACCAGTCCATTCTCCACCTCCACCGGTTTACTCTCCACCACCACCTGTCTACTCTCCTCCTCCCCCACCACCAGTTTACTCACCACCACCACCAGTTCATTCTCCACCTCCACCAGTGTACTCTCCACCACCACCTCCACCACCTGTTCACTCACCTCCTCCCCCAGTCCACTCACCACCACCACCCATCCACTCCCCACCACCACCAGTTTACTCTCCTCCTCCACCAGTCCACTCACCACCACCACCAGTGCAGTCTCCGCCACCACCACCAACATGGGAAGATATCATCCTCCCACCAATCTTCGGATCTGAATACAGGTCACCTCCACCACCAACAATTGCTGGATACTAA 2139 0.4783 MAHHYSNKALGCFLLFSIFVSSLSTFSHAHFGFIMDPRERISLPFPEDGGDAPVPAPESEVEPREERLKNAHVALQALKEAIYSDPFNVTGNWVGNDVCSYNGVFCAPALDDSSLDVVAGVDLNQADIAGHLPEELGLLKDVALFHINSNRFCGIVPQSLENLTLIHEFDISNNRFVGGFPSVVLNWPNLKYLDIRFNDFEGALPPELFQKELDAIFLNNNRFTSLIPETLGNSTASVVTFANNHFSGCIPKSIGNMVNLNEIVFIGNGLGGCIPQEIGMIKDVTVLDASNNEFVGTLPNLSELKKVEVIDIAHNNLTGYVSNTICQLPSLKNFTFSDNYFNGEAQACVPSSNSGVAFDDSSNCLPGKKNQKTSKQCFPVLTRHVDCSKQCGGGGSGNDKGNSNVPSTPKPTPSPSPVTEPPQTPKAEPPPTPKAEPPPTPKAESPQTPKAEPPPTPKAEPPPTPKVEPPATPKAEPPPTPKAEPPSTPKAEPPQTPKVEPPTVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVYSPPPPVHSPPPPPPVQSPPPPVHSPPPPVYSPPPPAHSPPPPVYSPPPPVHSPPPPVYSPPPPVYSPPPPPPVYSPPPPVHSPPPPVYSPPPPPPPVHSPPPPVHSPPPPIHSPPPPVYSPPPPVHSPPPPVQSPPPPPTWEDIILPPIFGSEYRSPPPPTIAGY. 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05318 712 Gene3D Ribonuclease Inhibitor 69 367 IPR032675 -
Seca10g05318 712 PRINTS Proline rich extensin signature 422 438 - -
Seca10g05318 712 PRINTS Proline rich extensin signature 446 458 - -
Seca10g05318 712 PRINTS Proline rich extensin signature 458 479 - -
Seca10g05318 712 PRINTS Proline rich extensin signature 405 417 - -
Seca10g05318 712 MobiDBLite consensus disorder prediction 408 691 - -
Seca10g05318 712 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 523 - -
Seca10g05318 712 FunFam Leucine-rich repeat extensin-like protein 1 72 233 - -
Seca10g05318 712 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 234 321 - -
Seca10g05318 712 MobiDBLite consensus disorder prediction 394 712 - -
Seca10g05318 712 Pfam Leucine rich repeat N-terminal domain 74 106 IPR013210 -
Seca10g05318 712 SUPERFAMILY L domain-like 73 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05318 Seca-Chr10 121314432 121316687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05318 1 619 Trihelix Transcription Factor Family AT3G19020 50.720 3.14e-173 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05318 - - aprc:113870095 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05318 10 121314432 121316687 Seca10g05318 10 121314432 121316687 ECH