Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05309 ATGGCATTTTCTGACACCACCAAGCAGCTCCCACTGAAACCAATCCCAGGCAGCTATGGCCTTCCATTCTTCGGACCAATCAGCGACAGACACGACTTCTTCTACCACCAAGGCCGCGACAACTTCTTCTCCACCAGAATCCAAAAATACAACTCCACCATCTTCCGAACCAACATGCCACCTGGCCCTTTCATCTCCTCCGATCCAAGAGTCATTGTCCTCCTCGACGGTGCCTCCTTCCCAATCCTCTTCGACAACAACAAGGTCCAAAAGCGCAACGTCCTCGACGGCACCTTCATGCCTTCCACCAGTTTCACCGGCGGCTACCGCGTCTGTGCATACCTTGACACCACAGAACCCAACCACGCCGTTTTAAAACAATTCTTCCTCAACATTCTCCTCTCACGAAAAGACTCTTTTGTCCCTCTCTTCCGCAGCACGCTATCGGAGTCCTTCGTCAAGATAGAGGACCAGCTGTCAGGAAAGACCGGCAAGGCTGACTTCAACGACGTGTTCAGCAACGCATCCTTCAACTTCATGTTCCGTCTCCTCTGTGACAACAAACACCCCTTGGAGACCAAGCTCGGTTCCCAAGGCCCAAAACTGTTTGACACGTGGCTCCTCTTTCAGCTCGCGCCACTTGCAACTTTGGGCCTCCCCAAGATCTTCAACCACCTCGAGGATCTCTTGCTCCGCACGCTCCCCTTCCCAGCGTGTTTGTCCAGATCCAACTATAATAAACTCTATGAGGTGTTTTATGCAACTGCGGGAACTGTGTTGGACGAGGCAGAGAAGGTTGGGTTAAAAAGAAGCGAAGCATGCCATAACCTCATTTTCATGGCGGGTTTCAATGCTTATGGTGGGTTGAAGAACCAGTTCCCAGCGGTGATCAAATGGGTAGGTTTGGGTGGAGAGGAACTCCATAAGCAACTTGCAAAGGAGATAAGGAGTGTGGTGAAAGAGGAAGGTGGAGTAACAATTCAATCCTTAGAGAAAATGCCTTTGATGAAATCAGTGGTTTATGAGGTGATGAGGATTGAGCCTGTTGTGCCGTACCAATACGCGAGGGCGAGGGAGGACTTGGTAGTGCAAAGCCACGATGCTGCGTTTGAGATCAAGAAGGGTGAGATGATCTTTGGGTTCCAACCGTTTGCGACAAAGGATCCTAGGATTTTCGAGGATCCTGAGGAGTTTGTGGCTAGGAGGTTTATGGGGGAAGGTGAGAAGATGTTGAAGCACGTGTTGTGGTCGAATGGGTTTGAGACGGAGGAGCCCTCTATGGATAATAAACAGTGTCCAGGGAAGAATCTAGTGGTGCTACTATGTAGGTTGTTCTTGGTGGAGTTCTTCTTGCGTTACGATACGTTTCAGTTTGAGTATAAAACCACTGCTTTTGGTTCTGCTATTACCATCAACTCTCTCACCAAGGCCTCCACCTTGTGA 1443 0.4983 MAFSDTTKQLPLKPIPGSYGLPFFGPISDRHDFFYHQGRDNFFSTRIQKYNSTIFRTNMPPGPFISSDPRVIVLLDGASFPILFDNNKVQKRNVLDGTFMPSTSFTGGYRVCAYLDTTEPNHAVLKQFFLNILLSRKDSFVPLFRSTLSESFVKIEDQLSGKTGKADFNDVFSNASFNFMFRLLCDNKHPLETKLGSQGPKLFDTWLLFQLAPLATLGLPKIFNHLEDLLLRTLPFPACLSRSNYNKLYEVFYATAGTVLDEAEKVGLKRSEACHNLIFMAGFNAYGGLKNQFPAVIKWVGLGGEELHKQLAKEIRSVVKEEGGVTIQSLEKMPLMKSVVYEVMRIEPVVPYQYARAREDLVVQSHDAAFEIKKGEMIFGFQPFATKDPRIFEDPEEFVARRFMGEGEKMLKHVLWSNGFETEEPSMDNKQCPGKNLVVLLCRLFLVEFFLRYDTFQFEYKTTAFGSAITINSLTKASTL. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05309 480 CDD CYP74 45 472 - -
Seca10g05309 480 SUPERFAMILY Cytochrome P450 9 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05309 480 Gene3D Cytochrome P450 6 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05309 480 PRINTS E-class P450 group IV signature 370 384 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05309 480 PRINTS E-class P450 group IV signature 386 404 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05309 480 PRINTS E-class P450 group IV signature 432 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05309 480 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05309 480 Pfam Cytochrome P450 306 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05309 480 PANTHER CYTOCHROME P450 26 9 453 - -
Seca10g05309 480 FunFam Allene oxide synthase, chloroplastic 10 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05309 Seca-Chr10 121132960 121137021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05309 1 478 Cytochrome P450 AT5G42650 50.833 1.01e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05309 K01723 - gmx:100801764 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05309 10 121132960 121137021 Seca10g05309 10 121132960 121137021 ECH