Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05264 ATGGAAGCTAAATTTCAGATTATGTCAACACAAGTCATAAAGCCCTTTACTACAACCCCTCATCATCTCAAACAATTCAATCTCTCATTTCTTGATCAAATCTCACCATATCAATACACTTCAGTCCTATTCTTCTACTCTGCATCCAATGTTAGTAGTGATGACACTAACTTTATATCCCTATGTGATAATCTGAAGGATTCTTTATCAAATGTGTTAACCCTTTACTACCCACTTTGTGGAAGAATCAAAGCAAATTCCTACATTGATTGTAATGATGCAGGTGTGCCTTTTATTGAGGCTAGAGTTTCCTCCCATCTCTCATCCATCCTAGAATACCCACAGGTCAATGTCTTGAAACAGTTACTTCCACTCGATCCATACGAACCCGTATTTGGCGATGTTAACTACGAAGAACTAGTCATGATGGCGGTTAAATTTAGCAAACTAAGTTGTGGTGGTGTAGTACTTGGTGTTTGCATGTCACATAAGATCATTGATGGTATAGGGATGACTTCTTTCTTTAATGCTTGGGTTGAAACAACGAAGGTAAGTGGCAACCCAACAAAACCTTGCATGGAAGCAAGTTTGTTATTTCCCACAAAAGACATGCATTTTACTACTCTATCAGCTGGTATTGTTGAAAACAAAGAACTTGTGATTGCAAGATTAGTGTTTGATGGGACAAGCTTGTCTAGGCTAAGAGATGAAATTGATGGCTATAGTCCCACTAGGGTTGAAGTTGTGACAGCTCTTATATGGAAATCAATGATGGAGGCAACCATAGGAAGTTCAAGGGGGAAAAAACCTGTAAGGTCTTTTGCATCACATGTTGTGAATATTCGTGGTCGCTTGGTGCCACCATTTCCAGAGAATAGCATAGGAAATGTTATTCAATTAGCTGTGACTCCATTGGTTGAAATGAATGTGGAAAAAAATGTTGGGTTGAAAGATTTGGTAGCAATGGTTAAGAAGGCAATAGTGGGACTTGATGTAGATTATGTGAGTAAACTTGGAAGTGATGTTGGGTTTGATAGGTTTATGGAGTCCAGAAAGAAATTGAAGCTTATGGTCTCTGAAGACATTCAATGGTCTAAGTTTTCTAGTTGGACAAGATTTCCTTTATATGAAGCTGATTTTGGATGGGGAAAGCCAACTTGGGTGAGTACTATTGTTTTTCCTATAAGAGATAATGTCATTTTGTTGCCCACAAGATGTGGGGAAGGGATAGAGGCATGGGTGACCTTGGATAAGGAGGTTATGGTTCAATTTGAACACAACGAAAAGCTTCTACAACATGCATCGGTCTCACGTGCCTCTTGA 1323 0.3893 MEAKFQIMSTQVIKPFTTTPHHLKQFNLSFLDQISPYQYTSVLFFYSASNVSSDDTNFISLCDNLKDSLSNVLTLYYPLCGRIKANSYIDCNDAGVPFIEARVSSHLSSILEYPQVNVLKQLLPLDPYEPVFGDVNYEELVMMAVKFSKLSCGGVVLGVCMSHKIIDGIGMTSFFNAWVETTKVSGNPTKPCMEASLLFPTKDMHFTTLSAGIVENKELVIARLVFDGTSLSRLRDEIDGYSPTRVEVVTALIWKSMMEATIGSSRGKKPVRSFASHVVNIRGRLVPPFPENSIGNVIQLAVTPLVEMNVEKNVGLKDLVAMVKKAIVGLDVDYVSKLGSDVGFDRFMESRKKLKLMVSEDIQWSKFSSWTRFPLYEADFGWGKPTWVSTIVFPIRDNVILLPTRCGEGIEAWVTLDKEVMVQFEHNEKLLQHASVSRAS. 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05264 440 PANTHER F21J9.9 6 434 - -
Seca10g05264 440 Pfam Transferase family 4 429 - -
Seca10g05264 440 Gene3D - 217 436 IPR023213 -
Seca10g05264 440 Gene3D - 2 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05264 Seca-Chr10 120166078 120167400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05264 4 425 Monolignol Biosynthesis Gene Families AT5G48930 25.333 4.05e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05264 - K13065 cave:132178476 343.969