Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05263 ATGGAAGATAAATTTGAGATTATGTCAACTCAAGTTATAAAGCCATCTTTTACAACCCCTCATCATCTCAAGTACTTCAAACTCTCATTTCTTGAACAAATTTCACCATATCAATACGTTTCAGTTCTCTTCTTTTACTCTGCATCTGATGTCAGTGGTTACGAAACCGGCTCTACATCCCTGTGTGATAATTTGAAGGCTTCTTTATCAAATGTGTTAAACCTTTACTACCCACTTTGTGGAAGAATCAAAGGAAATGCCTACATTGACTGTAATGATGCAGGTGTGCCTTTCATGGAGGCTAAAGTTTCCTCCCATCTCTCTTCCATCTTAGAATACCCACAGGTCAATGTCTTGAAACAATTACTTCCACTTGATCCATACGAACCAGTATTTGCAAATGTTAACTATGAGGAACTAGTCACATTGGCAGTTAAAGTTAGCAAACTAAGTTGTGGTGGTGTAGTACTTGGTGTTTGCATGTCACACAAGATTGTTGATGGTATAGGGATGACTTCTTTCCTCAATGCTTGGGTTGAAACAATGAAGGTAAGTGGCAACCCAAAAAAACCTTACATGGAAGCAAGTTTATTATTTCCTACAAAAGACATGCATTTTATTACTCTACCATCCGGCATGGTTGAAAACAAAGAACTTGTAACTGCAAGATTAGTGTTTGATGGGAAAAGCTTGTCTAGGCTAAGAGACGAAAATAATGGCTATAGTCCCACCAGGGTTGAAGTTGTGACGGCTCTTATATGGAAATCAATGATGGAGGCAACGATAGGGTGTTCGAGGGGGGAAAAACTTGTCAGGTCTTTTGCATCACATGTTGTGAATATTCGTAGTCGCATGGTGCCACCATTGCCAGAGAACAGCATAGGAAATGTTGTTCATTTTGTTGTGACACCATTAGTTGAATTCGAAGTGGACAAAAGTGTTGGGTTGCAAGATTTGGCAATAATGGTTAAGAAAGCGATAACGAGACTTGATGCAGATTATGTGAGTAAACTTGGAGATGATGGCGGGTTTGATTGGATTATGGAGTCTAGAGAGAAATTGAAGCTTATGATCTCTAAGGAGATTCAATGGTCTAAGTTTTCCAGTTGGACAAGATTTCCTTTATATGAAATTGATTTTGGATGGGGAAAGCCAACTTGGGTGAGTAGTCTTTGTTTTCCTTCAAGAGATAATGTCAAATTGTTGCCCACAAGATGTGGGAAAGGGATAGAGGCATGGGTTATCTTGGATAAAGAGGTTATGGTTCAATTTGAGCGTAACGAAAAGCTTCTACAATATGCATCGATCTTACGTGCCTCTTGA 1323 0.3908 MEDKFEIMSTQVIKPSFTTPHHLKYFKLSFLEQISPYQYVSVLFFYSASDVSGYETGSTSLCDNLKASLSNVLNLYYPLCGRIKGNAYIDCNDAGVPFMEAKVSSHLSSILEYPQVNVLKQLLPLDPYEPVFANVNYEELVTLAVKVSKLSCGGVVLGVCMSHKIVDGIGMTSFLNAWVETMKVSGNPKKPYMEASLLFPTKDMHFITLPSGMVENKELVTARLVFDGKSLSRLRDENNGYSPTRVEVVTALIWKSMMEATIGCSRGEKLVRSFASHVVNIRSRMVPPLPENSIGNVVHFVVTPLVEFEVDKSVGLQDLAIMVKKAITRLDADYVSKLGDDGGFDWIMESREKLKLMISKEIQWSKFSSWTRFPLYEIDFGWGKPTWVSSLCFPSRDNVKLLPTRCGKGIEAWVILDKEVMVQFERNEKLLQYASILRAS. 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05263 440 Pfam Transferase family 5 429 - -
Seca10g05263 440 Gene3D - 3 207 IPR023213 -
Seca10g05263 440 PANTHER F21J9.9 6 435 - -
Seca10g05263 440 Gene3D - 216 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05263 Seca-Chr10 120132136 120133458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05263 4 426 Monolignol Biosynthesis Gene Families AT5G48930 24.724 3.33e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05263 - K13065 egr:104439652 354.755