Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05244 ATGACCAATACAGCTTGGCCTTCATCCCAGTCTCACAACTCTGGCGTGACCTTAGGAAAATCTGCAACAACCTTCTATTCTCCAACAAGACCCTTGAAGGTTGAAGGCAGTGAAGAGCTAAGGCGCAAGAAGGTTCTAGAACTTTTCAACGACATCCATGAGAGCATACAAAGCAGGGGAATTCAAGGATATGGTTGCGAATATTATGAAAGAGATTGGGAGGCCAAATTTGGCGGATTGTTGAAGGTGGTGGATCCACATGGGATTAGAAGGCGCACAGGTAGTTACTTAGACAAGTTGTTGAACATCATCAAGAGGTTGGTTGACCAAAGGGTGAAGATGAGGAAAGAGAGTGGTTACTGTTCAAAAAATGATATGTTGGATGCGATGCTTGGCAATGCTGATGATGCGGAGGAAGAGGTGTATAAAGATAAGATTGAACGTTTGTCATTGGACTTGTTTGTGGCAGGTAATGACACAGTTACAACTATGGTAGAGTGGACAATGGCTGAGTTACTTCATAACCCGGATGTCATGTCTAAAGCAAAAGCAGAGTTAGAGAAAACTATTGGCAAAGGTAACTTGGTTGAAGAATCAGACATTAGGAGACTCCCTTACTTACATGCAATAGTGAAAGAGACTTTTAGGTTACATCCACCAGCGCCACTTTTGCTCCCTCGTAAAGCCGAAGTGGATCCGGAGATAAATGGCTATACGGTCCCAAAAGGTGCACAAGTGTTGGTTAATGTGTGGGCTATTGGGAGGGATCCCAATTTATGGGACAATTCGAATGTGTTTTCACCTGAAAGGTTCTTGGGTTCAGAAATTGACTTTAAAGGTCGAAATTTTGAGTTGACACCATTTGGTGCTGGGCGGAGAATATGTCCTGGCTTGCCATTGGCAATAAGGTTGTTGTTCTTGATGTTGGGTTTGCTTATCAATTGCTTTGACTGGGAGCTTGAAGGTGGAATAAAGCCAAAGGATATGAATATGGAAGAGAAGTTTGGGCTTACCTTACAGAAGGCTCAACCTATTCGAGTTGTTCCAATCAAAGTAAACAATTGA 1065 0.4282 MTNTAWPSSQSHNSGVTLGKSATTFYSPTRPLKVEGSEELRRKKVLELFNDIHESIQSRGIQGYGCEYYERDWEAKFGGLLKVVDPHGIRRRTGSYLDKLLNIIKRLVDQRVKMRKESGYCSKNDMLDAMLGNADDAEEEVYKDKIERLSLDLFVAGNDTVTTMVEWTMAELLHNPDVMSKAKAELEKTIGKGNLVEESDIRRLPYLHAIVKETFRLHPPAPLLLPRKAEVDPEINGYTVPKGAQVLVNVWAIGRDPNLWDNSNVFSPERFLGSEIDFKGRNFELTPFGAGRRICPGLPLAIRLLFLMLGLLINCFDWELEGGIKPKDMNMEEKFGLTLQKAQPIRVVPIKVNN. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05244 354 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 288 297 IPR017972 GO:0005506|GO:0016705
Seca10g05244 354 Coils Coil 97 117 - -
Seca10g05244 354 PRINTS P450 superfamily signature 286 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS P450 superfamily signature 156 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS P450 superfamily signature 209 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS P450 superfamily signature 295 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 Gene3D Cytochrome P450 36 352 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 FunFam Geraniol 8-hydroxylase 97 348 - -
Seca10g05244 354 MobiDBLite consensus disorder prediction 1 22 - -
Seca10g05244 354 Pfam Cytochrome P450 90 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 80 351 - -
Seca10g05244 354 SUPERFAMILY Cytochrome P450 81 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS E-class P450 group I signature 145 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS E-class P450 group I signature 165 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS E-class P450 group I signature 285 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS E-class P450 group I signature 249 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05244 354 PRINTS E-class P450 group I signature 295 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05244 Seca-Chr10 119857375 119860269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05244 75 351 Cytochrome P450 AT2G45570 51.246 1.37e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05244 - - lja:Lj2g3v0039250.1 420.624