Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05242 ATGTCTGTATATTTTCCCTTGCTGTGCATATTATCAGTAAGCATCCTCTTGTCATTCAAAAAGGTCTTCTTGGTGGGAGCAATAGCAAAACTTGGAGCAACTGTCACAACATATCCCTTACTAGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAAATTGGTGGAAGTAACTCATTAAGATACTCAGGTACTTTTGATGCTGTGCTTAAAATGATCCGTTATGAAGGATTGTCTGGCTTTTATAAGGGGATGAGCACAAAGATAGTACAAAGTGTTTTTGCAGCTTCTGTTCTTTTCATGGTTAAGGAGGAGCTTGTTAAGGCTTTCATGGTGGTGGCAGACAAGAGCAAAAAAGTTGTATCAAATGTGAGTAGATGA 378 0.3889 MSVYFPLLCILSVSILLSFKKVFLVGAIAKLGATVTTYPLLVVKSRLQAKQEIGGSNSLRYSGTFDAVLKMIRYEGLSGFYKGMSTKIVQSVFAASVLFMVKEELVKAFMVVADKSKKVVSNVSR. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05242 125 SUPERFAMILY Mitochondrial carrier 17 104 IPR023395 -
Seca10g05242 125 Gene3D Mitochondrial carrier domain 2 112 IPR023395 -
Seca10g05242 125 Pfam Mitochondrial carrier protein 19 110 IPR018108 -
Seca10g05242 125 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 108 IPR018108 -
Seca10g05242 125 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 19 113 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05242 Seca-Chr10 119788993 119790835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05242 17 118 Chloroplast and Mitochondria Gene Families AT2G47490 35.294 2.26e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05242 K13354 - gmx:100777898 188.734