Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05241 ATGGATACATTGAGTGAAGAAATTTTGTATAATATGATGGATAAAGGAGATTATAATATTTCTGACTTTGCGAACTTAAGAAATTTTAAGGAGAGGGATAAAGATAATGGACATTGTCAAAACTTACCAGAAGGTCACAAAAGGATTAATGAACTAACAGTTGATGATATTAAGGGTCTTGAATTTGATTCGGAAGAGGCTGCCTATGATTTCTATTCTGAGTATGCAAAATTTAAAGGATTTGCTGTTAGGAAAGATGATGTTTATCGGGATCGCAATAATTTGATTAGAATGAGGCAAATGGTTTGTAACAGGCAGGGGAAGAGAAGTGAAAAACATTTAAAAAAGACTGATAGAATTAGGGAGGCAAAGGCTATTACATGTACTAAATGTCATGCAAGGATTAGGGTTCATTTAGATTATAAGACCAGGAAGTGGAGGGTAGGGTTGTTTGAGCCAAATCACAATCATGACTTGACTCCTGCCAATATGGTGCATTTGCTACCTGCTTATCGTGGTTTGAGTGCTGGTGAAAAAGCTCAGGTTGATAGTCTTCACTTATATGGTGTTAGGACATGCCATATAATTGGTTTAATTATAGGTCAGAAGGGTGGATATTCTGATCTGGGTTTCTGCAAGAAGGATCTGTATAATCATATTGATAAGCAGAATAGAGCAAAAATAGGGGACGGTGATGCATTTGTAGCTTTGTGCTATCTGCAAGCGAAATTTGACAATAATCCTAAGATGTTTATTAAGTTTACAACCAGTGAAGATGATAGACTACAGAACTTGTTCTGGGCTGATATTGGTAGTAGAATTGACTATATATGTTTTGGGGATGTTGTTGCCTTTGACACAACATACAAGAAAAATAAGTATAACCGACCTTTGGTAATTTTCTCTGGTTATAACCATCATGGTGAAACTTGTATATTTGGATGTGCACTTGTTGCTGATGAGAAGACTGAAACTTACAAGTGGGTTCTTGAATCTTTTTTGGAGGCAATGTTTAATAAAATTCTGAAAGCTGTGGTAACTGATGGGGATGGTGCAATGCGTGAAGCTATAAGGACTGTTTTTCCAGGTGCACTTCACAGATTATGCTCATGGCACCTTCATCAAAATGCATGTGAAAATGTGAAGAATCCCAAGTTTCTGGAATATTTTAAGTCTCTTGTATATGGAAATTTCAGTATAGAGAAGTTTGAGGATGAGTGGAAGAAGGCCATTGACAATAATGGTCTAAACAACAATAAATGGGTGAGAAAAGTCTATGATTTGAGGAGGATGTGGGCCACTGCATACCTGAGGGATACCTTTTTTGGTGGAATAAGGACAACTTCAATTTGTGAAGGGATTAATTCCTTTATTAAGAGGTATGTTCAAAGCAAAAATAGTCTTGTTGATTTCCTCCATAACTTTGAGAGAGCCATTAATGAATACAGGCACAATGAGTTAATGTCTGATTTTAAGTCTTTGTACACTGATCCGGTTTTGACAACAGCACTGCAAAAGTATGAAGTTGATGCTTCTAAGATCTTCACTAGAAATAAGTTCTTTGATGTAAGAAAGCAAATTGAGAAAGTAGCAGCATTGAATGTGATAGATAGATCAGAAGTTGGAACTGAAGTTAGACTGAAATTAAATAAGTTTGGAAGTCCAGATTCTGTGTATTTTGTGTTGTGTGATAAGGCTAATTGTAAATTTGTTTGTGATTGCCGCTTATTTGAATCATGTGGTATCCCATGCTCTCACATCTTTTGTGCTATGAAGCATGAGCAAGTTGAATCTCTTCCCTCAAGTTTGGTGTGTAAAAGATGGACAAAGTATGCAAAAGTTCAGAACATATTTGATGTATATGGTGAAGAAGATGACTCATCAAAAAAGGATTTGTTGAGGTCTGGTGCTGTATCTGTAGCCTGCAATAGGCTTAGGAATGTAGTAGATAATAGACCATACCACTTTGTAAAAAACATTGAAAGAATTCACAAGTTGGCTGATGAAATTGAAAGGGAGGATGGTGGTGATATTAAAAATGGAGATATATCAAAGATTGTTCGTGATCCAACCATAGTCAAAACCAAAGGAGCTCCAAGAAAGAGTAAGAAAATGAAGAAAAAGAGAAAATGTTCTTTTTGTAAGCGGTCTGGGCACACAATTAGGACGTGCAGTAAGTTCTCCACTCGTGATTAG 2196 0.362 MDTLSEEILYNMMDKGDYNISDFANLRNFKERDKDNGHCQNLPEGHKRINELTVDDIKGLEFDSEEAAYDFYSEYAKFKGFAVRKDDVYRDRNNLIRMRQMVCNRQGKRSEKHLKKTDRIREAKAITCTKCHARIRVHLDYKTRKWRVGLFEPNHNHDLTPANMVHLLPAYRGLSAGEKAQVDSLHLYGVRTCHIIGLIIGQKGGYSDLGFCKKDLYNHIDKQNRAKIGDGDAFVALCYLQAKFDNNPKMFIKFTTSEDDRLQNLFWADIGSRIDYICFGDVVAFDTTYKKNKYNRPLVIFSGYNHHGETCIFGCALVADEKTETYKWVLESFLEAMFNKILKAVVTDGDGAMREAIRTVFPGALHRLCSWHLHQNACENVKNPKFLEYFKSLVYGNFSIEKFEDEWKKAIDNNGLNNNKWVRKVYDLRRMWATAYLRDTFFGGIRTTSICEGINSFIKRYVQSKNSLVDFLHNFERAINEYRHNELMSDFKSLYTDPVLTTALQKYEVDASKIFTRNKFFDVRKQIEKVAALNVIDRSEVGTEVRLKLNKFGSPDSVYFVLCDKANCKFVCDCRLFESCGIPCSHIFCAMKHEQVESLPSSLVCKRWTKYAKVQNIFDVYGEEDDSSKKDLLRSGAVSVACNRLRNVVDNRPYHFVKNIERIHKLADEIEREDGGDIKNGDISKIVRDPTIVKTKGAPRKSKKMKKKRKCSFCKRSGHTIRTCSKFSTRD. 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05241 731 ProSiteProfiles Zinc finger SWIM-type profile. 559 595 IPR007527 GO:0008270
Seca10g05241 731 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 635 IPR031052 GO:0006355
Seca10g05241 731 Pfam MULE transposase domain 282 376 IPR018289 -
Seca10g05241 731 SMART 26again6 570 597 IPR006564 GO:0008270
Seca10g05241 731 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05241 Seca-Chr10 119784662 119787492 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g05241 MULE 2.6e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05241 - - tpra:123910662 754.207