Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05210 ATGCCAGTGAATAACAGTTCCCTCAGTGAAAAGCTTGTTGGTGAGTGCAATGTTAAGGGTATCTCCAACTTCAGCACAAATAGACGGGCCAGGAAACTGGCCATTGATTCCTATCACAACATGCTTCAAGCAATCTGGTTTTCTGATCATGTACTCCATATCAAACTGCAATTCTATAGCCAAAACCTGTTCCAGAAGGACATTTTCAGTGCAATTGGATGGATCCCTCCTGCAAAGGAAATGAATGCAATCCATAAGGTTTATAAGATTTCAAAAGCACAAACACTTATAGCATTATTGAGTATTGTGCCAGGTTACCGGTTCACAGTAGCATTCATTGATTACACGGGTCGTTTTGCCATCCAATTTATTGGTTTCTTTTTCATGACTGTCTTCATGTATGCTCTGGCCATACCATATGATTATTGGACCAAGAAAGAAAACAGAATTGGGTTTGTGGTGATGTACTCACTCACCTTCTTCTTCGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATACTCCCAGCAAGGCTAAGGTTTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTAGGTGCACTTGGTTTCTTGCATGCTGCACAAAGTAAGGACCCCACCAAGACTGATAAAGGGTATCCAACTGGTATTGGGATTAAGAACTCCCTTATTATGCTTGTTGTGATCAACTTCGCTGGGATGTTATTCACCTTACTGGTTCCAAAATATGGCCATCTACCAAGCAACAAATTATTACAGGAAGAGGAAAAAAAGTTTACTGGTATAAGGAGAAAATAA 825 0.4109 MPVNNSSLSEKLVGECNVKGISNFSTNRRARKLAIDSYHNMLQAIWFSDHVLHIKLQFYSQNLFQKDIFSAIGWIPPAKEMNAIHKVYKISKAQTLIALLSIVPGYRFTVAFIDYTGRFAIQFIGFFFMTVFMYALAIPYDYWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEILPARLRFTCHGISAAAGKAGAIVGALGFLHAAQSKDPTKTDKGYPTGIGIKNSLIMLVVINFAGMLFTLLVPKYGHLPSNKLLQEEEKKFTGIRRK. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05210 274 Gene3D MFS general substrate transporter like domains 17 272 IPR036259 -
Seca10g05210 274 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 28 250 - -
Seca10g05210 274 SUPERFAMILY MFS general substrate transporter 96 252 IPR036259 -
Seca10g05210 274 Pfam Sugar (and other) transporter 110 241 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05210 Seca-Chr10 119206675 119207708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05210 54 266 Inorganic Solute Cotransporters AT3G54700 73.239 4.06e-109 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05210 K08176 - gmx:100780201 341.658