Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05194 ATGATGCATCTCCTCCACATTCCCTATCATTCCAACACCATGACCAAAGCTATGATCAATAGTCTCAACCTCACCACCTCTTGCTACTCCTCCCACATGGTAGCAGCCACAGGGAACTTGTTTTCCCACAGCCTATTTCTCTTGCAACATATCCAAATCCTTGAGATCATAATTGCAGCCATGGTTTTCATAGCCATTAATTCTTTAAGGTCAAAGAAGCATCATGGCCTACGGCCTGTCCTTGGAATGTTACCTTCCTTGGTCATAGGAATCAGAACCAACACATATGAATGGCTCACTGATGTTCTCAACAATCAAAATGGTACTTTTAGATACAAAGGGCCTTGGTTTTCTAGCCTCAATTGCATTGCCACCTCTGATCCTCGCAATGTGGAGCATCTTCTCAAGACAAAGTTCACTTTTTTCCCTAAAGGAAAGTTCTTTAGGGACACAACTTGTGATCTACTTGGAGATGGTATATTCAATGCAGATGATGAGACATGGCAGAGGCAGAGGAAGACAGCAAGCATTGAGTTTCATTCAACAAAGTTTAGGAAACTAACAACTGAGTCACTGTTTGAGCTTGTCCACAAGAGGCTCATACCTGTCTTAGAATCATCTGTTAAGAAATCTATTGCTATTGACCTTCAAGATGTGTTGTTAAGGCTCACTTTTGATAATGTTTGCATGATAGCCTTTGGTGTTGATCCTGGTTGTTCACAACCACACTTGCCTGAAATAGAATTTGCCAAAGCCTTTGAGGATGCCACAGAAGCCACAGCAATTCGATTTGTCAGCCCCGTTTGTGTATGGAAGGCCATGAAGTTTCTCAACTTGGGAATGGAGAGAAAGCTGAAGAAATCAATAGAGAAAGTGGATGAATTTGCTGAGAATGTTATTAGGACAAGGAAGAAAGAGCTCTCTTTGCAACATGATGAGGAGGGGAATAATAAGGAGAAATTAGACTTGTTAACAGTGTTTATGAGGCTCAAGGATGAGAATGGAAAAGCATATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTCATATTAGCTGGGAGGGACACTTCTTCAGTTGCTTTGAGCTGGTTTTTCTGGTTGATTGATCAGAATCCTGAAGTGGAGGAAAAAATACTAGCAGAGATTTGCAGGGTGGTGAGTCAGAGGGAGGGAATCAAGAAGGAAGACTTTGAAAATTCATTGAGATTTAGGCCAGAGGAGATAAAGAAGATGGACTATTTGCATGCTGCTCTCTCAGAAGCTCTCAGATTATATCCTTCTGTGCCTGTGGATCACAAGGAGGTGGTGGAAGATGACATGTTCCCTGATGGAACTCTGCTAAAGAAGGGAACAAAAGTGATCTATGCAATTTATTCAATGGGAAGAATGGAAAGCATATGGGGAAAGGATTGCAGGGAGTTCAAACCAGAAAGATGGCTAAGAGATGGCCATTTCATGAGTGAATCTGCTTACAAATTCACTGCATTCAATGGAGGACCTCGCTTTTGCTTAGGCAAAGATTTTGCATACTATCAGATGAAATATGCTGCAGCTAGCATCATATACCGTTACCATGTGAAGGTGGTAGAGGATCACCCTGTGGTGCCAAAGCTTGCTTTAACTCTCTACATGAAGCATGGATTGAAAGTTAACCTTCATAGGCGTCATGCAGCAGAAATTCAAAAACACTTCAAGTTTAGTTAA 1707 0.4136 MMHLLHIPYHSNTMTKAMINSLNLTTSCYSSHMVAATGNLFSHSLFLLQHIQILEIIIAAMVFIAINSLRSKKHHGLRPVLGMLPSLVIGIRTNTYEWLTDVLNNQNGTFRYKGPWFSSLNCIATSDPRNVEHLLKTKFTFFPKGKFFRDTTCDLLGDGIFNADDETWQRQRKTASIEFHSTKFRKLTTESLFELVHKRLIPVLESSVKKSIAIDLQDVLLRLTFDNVCMIAFGVDPGCSQPHLPEIEFAKAFEDATEATAIRFVSPVCVWKAMKFLNLGMERKLKKSIEKVDEFAENVIRTRKKELSLQHDEEGNNKEKLDLLTVFMRLKDENGKAYSDKFLRDICVNFILAGRDTSSVALSWFFWLIDQNPEVEEKILAEICRVVSQREGIKKEDFENSLRFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDMFPDGTLLKKGTKVIYAIYSMGRMESIWGKDCREFKPERWLRDGHFMSESAYKFTAFNGGPRFCLGKDFAYYQMKYAAASIIYRYHVKVVEDHPVVPKLALTLYMKHGLKVNLHRRHAAEIQKHFKFS. 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05194 568 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 PRINTS E-class P450 group I signature 494 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 PRINTS E-class P450 group I signature 416 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 PRINTS E-class P450 group I signature 504 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 497 506 IPR017972 GO:0005506|GO:0016705
Seca10g05194 568 Pfam Cytochrome P450 122 541 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 PANTHER CYTOCHROME P450 69 551 - -
Seca10g05194 568 PRINTS P450 superfamily signature 504 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 PRINTS P450 superfamily signature 495 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 Gene3D Cytochrome P450 68 561 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 FunFam Cytochrome P450 67 559 - -
Seca10g05194 568 SUPERFAMILY Cytochrome P450 78 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05194 568 CDD CYP86A 110 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05194 Seca-Chr10 118807128 118810735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05194 20 565 Cytochrome P450 AT5G23190 70.417 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05194 K15402 - gmx:100809503 887.1