Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05190 ATGCAACTTTTCACATTATTATTCAACTCTTCTAATCAATTCCTTAATAATATTATTCATCACTCTTCTTCCACCTTTCCCCTCATCATATTCTTCATCTTTCTCTCTTCTTTCTTCCTTCTCCTTCCTTTCATTCAATGGTGGCACCACCACAAGGACAAACACTTACCCCCTGGTTCAATGGGTTGGCCCTACCTTGGAGAGACCCTTAAACTCTACACCCAAAACCCGAATTCCTTCTTCTCCAAAAGGCAGAAACGGTATGGGGATATATTCAAGACTCACATACTTGGTTGTCCATGTGTGATGATATCAAGCCCTGAGGCAGCTAGAATTGTGCTAGTGAGTCAGGCACATCTTTTCAAGCCAACATACCCTCCAAGCAAAGAGAAGTTGATAGGACCAGAGGCTCTGTTCTTTCAACAGGGTGCCTATCACTCCATGCTCAAGAAGTTAGTTCAGGCCTCTTTTTTACCTTCCACAATTAAGAACTCATTCTCTCAGGTTGACCATATTGTCCTCAAACTTCTCCCAACTTGGGCCAATAGAACCATCAACACCTTGCAAGAGATGAAGAAGTATGCTTTTGAGGTAGCAGCAATCTCAGCCTTTGGTGAAATAAAGGAGTTTGAAATGGAAGAAATTAGAGACCTTTATCGTTGCTTGGAAAAGGGCTATAACTCTTATCCTTTACATCTCCCTGGAACTTCTTATTGGAAAGCAATGAAGGCAAGGAATCTTTTGAATGAGACAATAAGGAAGATAATACATAGAAGAAAGGAAAGAAGGAACTATGGAGAGGGGTTGTTGGGAGTTCTGTTGCAAGCAAGAGGTCACAAGATATATGAACTCACTGATTCTCAAGTTGCTGATAATCTCATAGGTGTCATATTTGCAGCACATGATACCACAGCAAGTGTTCTAACTTGGGTTCTAAAATACTTGCATGACAACATCAATCTCTTGGAAGCTGTCACAGTTATACAATTTCTTTATCTCTTTCTATTTTTCCTTTCATTATTCTTGAAGTTTTTATTATCCCTCCTGATTTTGATTCATTTCCCTCTAAATCTAATTATTATTATTTTGTTGCAGAAAGAACATGAAGGAATAAAAAACAAATTAGCTGCTGAAAACCGTGGACTTTCATGGGATGATACTAGGCAGATGCCCTTCACTAGCCGGGTAATTCAAGAGACATTGAGAAGCGCAAGCATACTATCATTCACATTCAGAGAAGCAGTGAAAGATGTTGAGCTGGACGGTTACTCTATTCCGAAAGGTTGGAAGGTTCTTCCACTCTTCAGAAGCATTCATCATTCTGCTGATTTCTTCCCTCAACCAGACAAGTTTGACCCTTCAAGATTCGAGGTGCCACCAAGACCATACACATATATGCCATTTGGAAATGGAGTCCACTCTTGTCCCGGTAGTGAGCTGGCTAAGCTTGAGGTTCTTGTCCTCCTCCACCATCTCACCCTTTCATACAGGTGGCAAGTTGTGGGAAATGAAGATGGAATACAGTACGGTCCTTTTCCTGTGCCCAAAAATGGATTACCAGTAAAGATAACCAAGAGGCAGTGGAACTAA 1590 0.4075 MQLFTLLFNSSNQFLNNIIHHSSSTFPLIIFFIFLSSFFLLLPFIQWWHHHKDKHLPPGSMGWPYLGETLKLYTQNPNSFFSKRQKRYGDIFKTHILGCPCVMISSPEAARIVLVSQAHLFKPTYPPSKEKLIGPEALFFQQGAYHSMLKKLVQASFLPSTIKNSFSQVDHIVLKLLPTWANRTINTLQEMKKYAFEVAAISAFGEIKEFEMEEIRDLYRCLEKGYNSYPLHLPGTSYWKAMKARNLLNETIRKIIHRRKERRNYGEGLLGVLLQARGHKIYELTDSQVADNLIGVIFAAHDTTASVLTWVLKYLHDNINLLEAVTVIQFLYLFLFFLSLFLKFLLSLLILIHFPLNLIIIILLQKEHEGIKNKLAAENRGLSWDDTRQMPFTSRVIQETLRSASILSFTFREAVKDVELDGYSIPKGWKVLPLFRSIHHSADFFPQPDKFDPSRFEVPPRPYTYMPFGNGVHSCPGSELAKLEVLVLLHHLTLSYRWQVVGNEDGIQYGPFPVPKNGLPVKITKRQWN. 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05190 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Seca10g05190 529 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PANTHER CYTOCHROME P450 26 54 515 - -
Seca10g05190 529 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 SUPERFAMILY Cytochrome P450 52 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 Gene3D Cytochrome P450 358 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 Gene3D Cytochrome P450 48 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 Pfam Cytochrome P450 57 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g05190 529 Pfam Cytochrome P450 366 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05190 Seca-Chr10 118725286 118735845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05190 30 521 Cytochrome P450 AT3G19270 52.716 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05190 K09843 - gmx:100782541 782.711