Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05174 ATGATGTTGTGGAAGCCAGTTTTTGTGATGATTGTAGTTAATTTAGCTCTGGCTTTTGTCAATGTATTTCTGAAGAAGGTTCTTAATGAAGGAATGGACCACTTTACCATTCTAACATATCGTCAGGCAATTTCAGCAATTTTCTTGGCACCTATTGCTTGCATATGTGAAAGGAAAAGCAAGATGGATGGTCACATAATATGTCTCCTTTTCCTAAGTGCTCTTGTTGGAGTAACACTCACTCAGTACCTCTTTCTTATTGGACTTGAATATACATCTGCCACATTCTCATGTGCATTCCTCAACATGGTGCCTGTCTTCACATTCATTATGGCACTGCCATTGGGGATAGAGAAGGTGAGCATGAAAAGCAAGAGTTCTATAGCCAAGGTCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGTCATTGATCCTTTATAAAGGAATGCCCTTAATCAACCCACACTCTCAGCACGTAGCAGACAAAGCCACAACAACACCATCAGCCTCGCAGTTAAAGAAATGGATTGTAGGTTCAATATTTCTGACTGCAGCCTGCCTCTTCTGGTCTTCATGGTTTCTTTTACAAGCAAGGATTGGTAAAAAGTATCCATATCAGTACTCTAGCACAGCCATTATGTCACTTTTTGCAGCCATTCAATCAGCAATGTTAACTTTGGTCATCCATAGAAATAATGCCAAATGGACTCTCAAAGGGAAGTTAGAAATATTGACTGTTGTATATGCTGTAAGTATATTCTTTATGACAAAATACATTATTTTGAATGTTTCTGAAATATTCTGTGAAAGTTTCTTTCCAAATTACAAATTAAAATCTGATCCTCAATTAGCAATTTTACAAGATTAA 870 0.3736 MMLWKPVFVMIVVNLALAFVNVFLKKVLNEGMDHFTILTYRQAISAIFLAPIACICERKSKMDGHIICLLFLSALVGVTLTQYLFLIGLEYTSATFSCAFLNMVPVFTFIMALPLGIEKVSMKSKSSIAKVLGTFVCIGGALSLILYKGMPLINPHSQHVADKATTTPSASQLKKWIVGSIFLTAACLFWSSWFLLQARIGKKYPYQYSSTAIMSLFAAIQSAMLTLVIHRNNAKWTLKGKLEILTVVYAVSIFFMTKYIILNVSEIFCESFFPNYKLKSDPQLAILQD. 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05174 289 Pfam EamA-like transporter family 5 142 IPR000620 GO:0016020
Seca10g05174 289 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 148 - -
Seca10g05174 289 PANTHER WAT1-RELATED PROTEIN 6 260 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05174 Seca-Chr10 118350564 118353821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05174 3 252 Nodulin-like Gene Family AT3G30340 47.222 1.12e-80 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05174 - - gmx:100794199 400.593