Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05170 ATGGTGACACTTTCAGGAGCACATTCAATAGGAGTATCACATTGTTCCTCCTTCTCTAAGCGCCTGATTACACAAGATCCATCCATGGACCCTTCATTTGCTGCATCATTGAAAACCAAGTGTCCACCACCACCAAGCAACACAGACCCAATAGTGGTTCTTGATACTATTACCCCTAATCGTTTGGACAACAAGTACTATGAGGGATTGGTCAACCATCGTGGCTTGTTGATCTCAGATCAAACATTATTAAGTAGCCAATCAACACAACAAATGGTGTTAAGCAATGCTAATTATGGTTCAAATTGGGCAACCAAGTTTGCAGAAGCAATGGTTCATATGGGTTCTATAGATGTGCTAACTGGCTATGATGGTGAGATCAGGAAGCATTGCAGCTTTGTTAATTAA 408 0.4118 MVTLSGAHSIGVSHCSSFSKRLITQDPSMDPSFAASLKTKCPPPPSNTDPIVVLDTITPNRLDNKYYEGLVNHRGLLISDQTLLSSQSTQQMVLSNANYGSNWATKFAEAMVHMGSIDVLTGYDGEIRKHCSFVN. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05170 135 PRINTS Plant peroxidase signature 69 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g05170 135 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g05170 135 PRINTS Plant peroxidase signature 53 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g05170 135 Pfam Peroxidase 1 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g05170 135 FunFam Peroxidase 1 114 - -
Seca10g05170 135 Gene3D Peroxidase, domain 2 1 114 - -
Seca10g05170 135 PANTHER - 1 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g05170 135 SUPERFAMILY Heme-dependent peroxidases 1 135 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g05170 135 ProSiteProfiles Plant heme peroxidase family profile. 1 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g05170 135 Gene3D - 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05170 Seca-Chr10 118266822 118267229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05170 1 135 Peroxidase AT1G14550 44.853 4.29e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05170 K00430 - gmx:100786791 188.734