Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca10g05167 | ATGTCTCTGACATCCAAGGTTCTGCCTGCTCTCCAGCCTATCAAATCATTACCTCCTGATTTCAAGGTTATTGGTAACTTGACCCCTGATCTAATGGAAAACTGTGGAGATGCTAAATTGAGAAGCTCTGATGTGATTGGATCAAGTAGTCCTCAAAATGATGCTCTGATGGGGGAAGTTTCTGAGGAAGCCCAGTACTGTGCTGGTGATACGGGTCTGTTCGATGAGGACTTAGCGTACAGAGGAAATGGTGTATCATTAGAGGACAAGCCATCAATTGCTGATGAAGGCTTAGAATCTGTACCTCTGCCCCTTCCATCAATTTCATTGTCCTCTAGGGAACGCAGGTGGAGTGATACAACACCGTATGCTTCAAAGAAGAAGCTGCAGTCTTGGTTTCAACTCCCTAATGGGAATTGGGAGCTGGCAAAGATAATAAAAACTTCTGGAACTGAATCTGTCATTTCACTGCCTGATGGGAAGGTTTTGAGAGTGAAAGAAGAAAGTTTGATATCAGCAAATCCTGATATTCTTGATGGAGTCAATGACCTCATGCAACTTAGTTATTTAAACGAACCATCAGTTTTATACAATCTGCAATATAGATACAATCAAAATATGATTTATACAAAAGCGGGGCCTGTTTTGGTTGCAATAAATCCCTTTAAGAAAGTTCCTCTGTATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTATATGCAATTACAGACACAGCCATCCGAGAAATGATACGGGATGAAGTTAATCAATCCATAATTATAAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCTAAAACACTGAGAAATGACAACTCGAGTCGTTTTGGAAAGCTCATTGAGATTCACTTTAGTGAAACTGGAAAAATCTCTGGTGCTAATATCCAAACATGTAAGTTTTCTGCTGATGAACAGTCTAGAGTGGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAATTATGTGCTGGTGCACCACCATCTCTCCGGGGGAAGCTAAACCTACAAAATGCAGAAGACTATAAATATTTGAGACACAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTCACACAGTCATGGAAGCTCTTGATGTTGTCCACATAAGTAAAGAAGACCAAGAGACTGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCGTTTACTGTGATTGATAATGAAAACCATGTTCAAGCTATAGAAGATGAGGGTCTGTTACACGTTGCCAAATTGATTGGCTGTGACATTGAAGATCTCAAGTTGACCCTATCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAAAAGTTGACACTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGCCTGTTTGATTGGTTGGTTGAACAAATAAATATATCACTTGCTGTTGGCAAAAGACGTACGGGCAGATCAATCAGTATTCTAGATATATACGGATTTGAATCCTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATACAAGATGGGATTGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTCAATCTTTTTGAGAAGAGGCCACTGGGGTTATTATCCCTGTTAGATGAAGAGTCCACCTTTCCGAATGGCACAGATTTAACATTTGCTAACAAGCTTAAACAGCATTTGAATTCTAATTCGTGTTTCAAAGGAGAAAGAGACCAAGCTTTTACTGTTTGTCATTATGCCGGGGAGGTCACCTATGATACAACTGGATTCCTGGAGAAGAACAGGGACCTGTTGCACTTGGATTCCATACAACTTCTATCCTCATGCACATGTCGTCTTCCTCAAATATTTGCATCCAATATGCTAACTCAGTCTGACAAGCCGGTGGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAATTGTTCCAACTGATGCAACGTTTAGAGAGCACTACTCCACATTTTATTCGCTGCATTAAGCCCAATAATCTCCAATCACCTGAATCATATGAGCAAGGGCTTGTACTGCAACAGCTTAGATGCTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCAGGCTTTCCAACAAGAATGTCCCACCAAAAGTTTGCCAGAAGATATGGCTTTCTTCTCCTTGATAATGTTGCATCTCAGGATCCACTTAGTGTTTCAGTTGCTATTCTTCATCAATTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACGAAATTATTTTTCCGAACAGGGCAGATTGGTGTGCTTGAAGATACTAGAAATCGTACCCTTCATGGAATTTTACGTGTGCAAAGTTGCTTCAGGGGTTATCAAGCTCGCTGTTCTGCCAAGGAGCTTCGGGGAGGAATCACTATGCTGCAGTCATTTATCAGGGGAGATAAAACCAGAAAGGCATATGCAACTTTGCTTCAGAGACATAGAGCTGCTACTATTATACAGAAGTGGATAAAAGCAGTATTTGCAAGAAACAGAACACGGATTATTAGTGATGCTGCAATTGTCATACAATCTGTTATTCGTGGATGGTTGGTCAGAAGGTGCTCAGGAGATATTGGATTTTTGAATTCCGGAGACCTGAAGACAAAAGAGTCAGATGAGGTTGTGGTTAAGTCGTCTTTCCTGGCTGAGTTACAACGGAGAGTACTGAAGGCTGAAGCTGCCCTGAGAGAAAAAGAAGAGGAAAATGACATCCTTAACCAACGCCTCCAACAATATGAGAGCAGATGGTCTGAGTATGAATTGAAGATGAAATCCATGGAAGAAGTGTGGCAGAAGCAAATGAGATCCCTACAATCTAGCCTCTCCATTGCGAAGAAGAGTCTTGCTATTGATGACTCTGAAAGAAATTCAGATGCGTCCTTTAATGCAAGTGATGAGAGGGATTACAGCTGGGATGTGGGAAGTAATCACAGACGCCAAGAGAGCAATGGGGCAAGATCAACTAGTGCTGGTTTGAGTGTTATAAGTAGGCTGGCTGAAGAATTCGAGCAGAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTGAAATCTGGTCAAGTGGAAGCAAGCTTGAACCCAGATCAAGAGCTCAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGAGTATGGGGGAAGACTGCGTGAAACAAAGGTCATTTTAAATAAACTTGGAACTGAAGATGGTGCACTTGAGAAAATGAAGAAGAAATGGTGGGGAAGAAGGAACAGTACAAGGATAAATTGA | 3540 | 0.4068 | MSLTSKVLPALQPIKSLPPDFKVIGNLTPDLMENCGDAKLRSSDVIGSSSPQNDALMGEVSEEAQYCAGDTGLFDEDLAYRGNGVSLEDKPSIADEGLESVPLPLPSISLSSRERRWSDTTPYASKKKLQSWFQLPNGNWELAKIIKTSGTESVISLPDGKVLRVKEESLISANPDILDGVNDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCKFSADEQSRVVQCNEGERSYHIFYQLCAGAPPSLRGKLNLQNAEDYKYLRHSNCYSITGVNDAEEFHTVMEALDVVHISKEDQETVFAMLAAVLWLGNISFTVIDNENHVQAIEDEGLLHVAKLIGCDIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINISLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDQAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCRLPQIFASNMLTQSDKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARCSAKELRGGITMLQSFIRGDKTRKAYATLLQRHRAATIIQKWIKAVFARNRTRIISDAAIVIQSVIRGWLVRRCSGDIGFLNSGDLKTKESDEVVVKSSFLAELQRRVLKAEAALREKEEENDILNQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASFNASDERDYSWDVGSNHRRQESNGARSTSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKEYGGRLRETKVILNKLGTEDGALEKMKKKWWGRRNSTRIN. | 1180 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca10g05167 | 1179 | Gene3D | Kinesin motor domain | 183 | 783 | IPR036961 | - | |
| Seca10g05167 | 1179 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 126 | 175 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Seca10g05167 | 1179 | MobiDBLite | consensus disorder prediction | 1047 | 1083 | - | - | |
| Seca10g05167 | 1179 | ProSiteProfiles | IQ motif profile. | 879 | 908 | IPR000048 | GO:0005515 | |
| Seca10g05167 | 1179 | FunFam | Myosin heavy chain | 364 | 420 | - | - | |
| Seca10g05167 | 1179 | ProSiteProfiles | Myosin motor domain profile. | 179 | 854 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Seca10g05167 | 1179 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 153 | 902 | IPR027417 | - | |
| Seca10g05167 | 1179 | Gene3D | - | 907 | 948 | - | - | |
| Seca10g05167 | 1179 | Gene3D | - | 858 | 906 | - | - | |
| Seca10g05167 | 1179 | PANTHER | MYOSIN | 174 | 1172 | - | - |
Showing 1 to 10 of 34 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca10g05167 | - | K10357 | gmx:100781736 | 2122.05 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Seca10g05167 | 10 | 118210380 | 118225872 | Seca10g05167 | 10 | 118210380 | 118225872 | ECH |
Showing 1 to 1 of 1 entries