Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05167 ATGTCTCTGACATCCAAGGTTCTGCCTGCTCTCCAGCCTATCAAATCATTACCTCCTGATTTCAAGGTTATTGGTAACTTGACCCCTGATCTAATGGAAAACTGTGGAGATGCTAAATTGAGAAGCTCTGATGTGATTGGATCAAGTAGTCCTCAAAATGATGCTCTGATGGGGGAAGTTTCTGAGGAAGCCCAGTACTGTGCTGGTGATACGGGTCTGTTCGATGAGGACTTAGCGTACAGAGGAAATGGTGTATCATTAGAGGACAAGCCATCAATTGCTGATGAAGGCTTAGAATCTGTACCTCTGCCCCTTCCATCAATTTCATTGTCCTCTAGGGAACGCAGGTGGAGTGATACAACACCGTATGCTTCAAAGAAGAAGCTGCAGTCTTGGTTTCAACTCCCTAATGGGAATTGGGAGCTGGCAAAGATAATAAAAACTTCTGGAACTGAATCTGTCATTTCACTGCCTGATGGGAAGGTTTTGAGAGTGAAAGAAGAAAGTTTGATATCAGCAAATCCTGATATTCTTGATGGAGTCAATGACCTCATGCAACTTAGTTATTTAAACGAACCATCAGTTTTATACAATCTGCAATATAGATACAATCAAAATATGATTTATACAAAAGCGGGGCCTGTTTTGGTTGCAATAAATCCCTTTAAGAAAGTTCCTCTGTATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTATATGCAATTACAGACACAGCCATCCGAGAAATGATACGGGATGAAGTTAATCAATCCATAATTATAAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCTAAAACACTGAGAAATGACAACTCGAGTCGTTTTGGAAAGCTCATTGAGATTCACTTTAGTGAAACTGGAAAAATCTCTGGTGCTAATATCCAAACATGTAAGTTTTCTGCTGATGAACAGTCTAGAGTGGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAATTATGTGCTGGTGCACCACCATCTCTCCGGGGGAAGCTAAACCTACAAAATGCAGAAGACTATAAATATTTGAGACACAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTCACACAGTCATGGAAGCTCTTGATGTTGTCCACATAAGTAAAGAAGACCAAGAGACTGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCGTTTACTGTGATTGATAATGAAAACCATGTTCAAGCTATAGAAGATGAGGGTCTGTTACACGTTGCCAAATTGATTGGCTGTGACATTGAAGATCTCAAGTTGACCCTATCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAAAAGTTGACACTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGCCTGTTTGATTGGTTGGTTGAACAAATAAATATATCACTTGCTGTTGGCAAAAGACGTACGGGCAGATCAATCAGTATTCTAGATATATACGGATTTGAATCCTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATACAAGATGGGATTGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTCAATCTTTTTGAGAAGAGGCCACTGGGGTTATTATCCCTGTTAGATGAAGAGTCCACCTTTCCGAATGGCACAGATTTAACATTTGCTAACAAGCTTAAACAGCATTTGAATTCTAATTCGTGTTTCAAAGGAGAAAGAGACCAAGCTTTTACTGTTTGTCATTATGCCGGGGAGGTCACCTATGATACAACTGGATTCCTGGAGAAGAACAGGGACCTGTTGCACTTGGATTCCATACAACTTCTATCCTCATGCACATGTCGTCTTCCTCAAATATTTGCATCCAATATGCTAACTCAGTCTGACAAGCCGGTGGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAATTGTTCCAACTGATGCAACGTTTAGAGAGCACTACTCCACATTTTATTCGCTGCATTAAGCCCAATAATCTCCAATCACCTGAATCATATGAGCAAGGGCTTGTACTGCAACAGCTTAGATGCTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCAGGCTTTCCAACAAGAATGTCCCACCAAAAGTTTGCCAGAAGATATGGCTTTCTTCTCCTTGATAATGTTGCATCTCAGGATCCACTTAGTGTTTCAGTTGCTATTCTTCATCAATTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACGAAATTATTTTTCCGAACAGGGCAGATTGGTGTGCTTGAAGATACTAGAAATCGTACCCTTCATGGAATTTTACGTGTGCAAAGTTGCTTCAGGGGTTATCAAGCTCGCTGTTCTGCCAAGGAGCTTCGGGGAGGAATCACTATGCTGCAGTCATTTATCAGGGGAGATAAAACCAGAAAGGCATATGCAACTTTGCTTCAGAGACATAGAGCTGCTACTATTATACAGAAGTGGATAAAAGCAGTATTTGCAAGAAACAGAACACGGATTATTAGTGATGCTGCAATTGTCATACAATCTGTTATTCGTGGATGGTTGGTCAGAAGGTGCTCAGGAGATATTGGATTTTTGAATTCCGGAGACCTGAAGACAAAAGAGTCAGATGAGGTTGTGGTTAAGTCGTCTTTCCTGGCTGAGTTACAACGGAGAGTACTGAAGGCTGAAGCTGCCCTGAGAGAAAAAGAAGAGGAAAATGACATCCTTAACCAACGCCTCCAACAATATGAGAGCAGATGGTCTGAGTATGAATTGAAGATGAAATCCATGGAAGAAGTGTGGCAGAAGCAAATGAGATCCCTACAATCTAGCCTCTCCATTGCGAAGAAGAGTCTTGCTATTGATGACTCTGAAAGAAATTCAGATGCGTCCTTTAATGCAAGTGATGAGAGGGATTACAGCTGGGATGTGGGAAGTAATCACAGACGCCAAGAGAGCAATGGGGCAAGATCAACTAGTGCTGGTTTGAGTGTTATAAGTAGGCTGGCTGAAGAATTCGAGCAGAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTGAAATCTGGTCAAGTGGAAGCAAGCTTGAACCCAGATCAAGAGCTCAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGAGTATGGGGGAAGACTGCGTGAAACAAAGGTCATTTTAAATAAACTTGGAACTGAAGATGGTGCACTTGAGAAAATGAAGAAGAAATGGTGGGGAAGAAGGAACAGTACAAGGATAAATTGA 3540 0.4068 MSLTSKVLPALQPIKSLPPDFKVIGNLTPDLMENCGDAKLRSSDVIGSSSPQNDALMGEVSEEAQYCAGDTGLFDEDLAYRGNGVSLEDKPSIADEGLESVPLPLPSISLSSRERRWSDTTPYASKKKLQSWFQLPNGNWELAKIIKTSGTESVISLPDGKVLRVKEESLISANPDILDGVNDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCKFSADEQSRVVQCNEGERSYHIFYQLCAGAPPSLRGKLNLQNAEDYKYLRHSNCYSITGVNDAEEFHTVMEALDVVHISKEDQETVFAMLAAVLWLGNISFTVIDNENHVQAIEDEGLLHVAKLIGCDIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINISLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDQAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCRLPQIFASNMLTQSDKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARCSAKELRGGITMLQSFIRGDKTRKAYATLLQRHRAATIIQKWIKAVFARNRTRIISDAAIVIQSVIRGWLVRRCSGDIGFLNSGDLKTKESDEVVVKSSFLAELQRRVLKAEAALREKEEENDILNQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASFNASDERDYSWDVGSNHRRQESNGARSTSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKEYGGRLRETKVILNKLGTEDGALEKMKKKWWGRRNSTRIN. 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05167 1179 Gene3D Kinesin motor domain 183 783 IPR036961 -
Seca10g05167 1179 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 MobiDBLite consensus disorder prediction 1047 1083 - -
Seca10g05167 1179 ProSiteProfiles IQ motif profile. 879 908 IPR000048 GO:0005515
Seca10g05167 1179 FunFam Myosin heavy chain 364 420 - -
Seca10g05167 1179 ProSiteProfiles Myosin motor domain profile. 179 854 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 902 IPR027417 -
Seca10g05167 1179 Gene3D - 907 948 - -
Seca10g05167 1179 Gene3D - 858 906 - -
Seca10g05167 1179 PANTHER MYOSIN 174 1172 - -
Seca10g05167 1179 FunFam Unconventional myosin-XIX 552 744 - -
Seca10g05167 1179 CDD MYSc_Myo8 193 842 IPR036022 -
Seca10g05167 1179 Gene3D - 364 423 - -
Seca10g05167 1179 Gene3D - 550 744 - -
Seca10g05167 1179 ProSiteProfiles IQ motif profile. 858 884 IPR000048 GO:0005515
Seca10g05167 1179 MobiDBLite consensus disorder prediction 1069 1083 - -
Seca10g05167 1179 ProSiteProfiles IQ motif profile. 928 957 IPR000048 GO:0005515
Seca10g05167 1179 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 PRINTS Myosin heavy chain signature 540 568 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 Gene3D - 787 855 - -
Seca10g05167 1179 SMART iq_5 904 926 IPR000048 GO:0005515
Seca10g05167 1179 SMART iq_5 878 900 IPR000048 GO:0005515
Seca10g05167 1179 SMART iq_5 927 949 IPR000048 GO:0005515
Seca10g05167 1179 SMART iq_5 855 877 IPR000048 GO:0005515
Seca10g05167 1179 Gene3D Myosin VI head, motor domain, U50 subdomain 425 722 - -
Seca10g05167 1179 Pfam Myosin head (motor domain) 181 842 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 Pfam IQ calmodulin-binding motif 860 875 IPR000048 GO:0005515
Seca10g05167 1179 Pfam IQ calmodulin-binding motif 930 946 IPR000048 GO:0005515
Seca10g05167 1179 Pfam IQ calmodulin-binding motif 906 925 IPR000048 GO:0005515
Seca10g05167 1179 SMART MYSc_2a 173 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca10g05167 1179 Coils Coil 974 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05167 Seca-Chr10 118210380 118225872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05167 3 1177 Myosins gene family AT1G50360 74.172 0.0 1783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05167 - K10357 gmx:100781736 2122.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05167 10 118210380 118225872 Seca10g05167 10 118210380 118225872 ECH