Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05127 ATGTTTTGGAAGGAGAATAATGGTAATGGCTACCAGCAGCAGCCACCGGGACCGGGAATGGGGTACAACCAGAGCCACAGACACAGAGAGCGAGTCCGTCGTGGCACTCGCAGGTCACGTGCTTCCCCTTCCTCTTCTTCTTCTACTTCCCTTAGGGTTTGTGATAGCGAGCAAAATCATCGACCCCCTTGCACGGATTACGACATGGCCTATTTCCATTCTTACGCTCACCTTGGTATCCACCAAGAGATGATCAAGGATCGTGTGCGCACTGAAACTTATAGGGAAGCAATAATGCGGCATCAGAGTTTTATTGCAGGCAAAGTTGTAGTTGATGTAGGATGTGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCCGGTGCAAAGCGGGTTTATGCAGTTGATGCTAGTGATATTGCCCTGCAGCATGAGAAGCTAAAGTACTTCTTTTATTCTGAAGCACTCAAGCCCCCTGATCAGCACACCATATACAATAAAATTGGATAG 510 0.4745 MFWKENNGNGYQQQPPGPGMGYNQSHRHRERVRRGTRRSRASPSSSSSTSLRVCDSEQNHRPPCTDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQHEKLKYFFYSEALKPPDQHTIYNKIG. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05127 169 Gene3D Vaccinia Virus protein VP39 52 152 IPR029063 -
Seca10g05127 169 MobiDBLite consensus disorder prediction 1 20 - -
Seca10g05127 169 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 144 IPR029063 -
Seca10g05127 169 MobiDBLite consensus disorder prediction 1 59 - -
Seca10g05127 169 Pfam Ribosomal protein L11 methyltransferase (PrmA) 106 144 - -
Seca10g05127 169 CDD AdoMet_MTases 110 144 - -
Seca10g05127 169 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 68 169 IPR025799 GO:0016274|GO:0018216
Seca10g05127 169 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 42 146 IPR025799 GO:0016274|GO:0018216
Seca10g05127 169 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05127 Seca-Chr10 117262386 117266044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05127 52 139 C2H2 Transcription Factor Family AT3G12270 51.136 2.04e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05127 K11437 - gmx:100809174 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05127 10 117262386 117266044 Seca10g05127 10 117262386 117266044 ECH