Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05126 ATGGTTGAGGTTGTGAATGCAAATAAGTTGTCTATGATGTTTAATAGCTCTTTATACCTTGAGCTCTTGGTTTCAATTAATTACTTTTCTTTTTGCAAGCAGGCAAATGAAGTTGTCAAAGCAAATAACCTGTCTGATGTCGTTGTTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGGTGCTTGTTAGGATTCTTCTGAGCATGCTTGGGAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGCGGTCTTATACTTCCTTCAAGTGCAACGGTATCTGTATATATTTTTACTAATATATAG 366 0.3743 MVEVVNANKLSMMFNSSLYLELLVSINYFSFCKQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYEVLVRILLSMLGSVITARDRWLKPGGLILPSSATVSVYIFTNI. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05126 121 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 31 115 IPR025799 GO:0016274|GO:0018216
Seca10g05126 121 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 31 113 IPR029063 -
Seca10g05126 121 Gene3D Vaccinia Virus protein VP39 9 108 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05126 Seca-Chr10 117253870 117258291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05126 36 118 C2H2 Transcription Factor Family AT3G12270 48.864 2.99e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05126 K11437 - gmx:100809174 124.405