Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05124 ATGCAGCCTAAGCCTATCCCTTTGGGAATCTCAACTCCTTTAAACACCACTAAAATCTCACCTTTCAATATTACTTCTACCAAACCAACCTCTTTCCCATCCAAAATTTCACCTTCCTCTAATGAATTCTCCGTCCTTTCTCTCTCCCTGTCAGGATTTTGCAGGGCCAGTCAATTTGTTGATTTGTTCCCAACTGTATCTCCTGAAATTATTGTCCGTGAGGCAAGATTAGAGGACTACTGGGAAGTGGCAGAGACTCACTGCAACACCTTCTTCCCAGAATATTCCTTCCCATTAGATTTTATGCTGAGGATTGACAGATTGGTGGTGGCTATGTTAGCAGCTATGTTAGCAAGATTGGCTAGGCCAAGAGGTTGCAGAAGAATCTGTTTGGTGGCTGTTACTAGCAGCTCACTTGATGAAACCTTTCTGTTTCGAAATGGAGATCTTAAGATTGGTGGTTTTGATGGGAAATTTAGCCTCAACAAGGGATATGTGGCTGGTATATTAACAATAGACAATATTGCAGACTTTCTACCAAGAAAGGGACCAATGCGACAGAGAAGGACTGGAATTGCATACATATCCAATGTGGCAGTCCGGGAAAATTTTCGGAGGAAGGGAATAGCTAAAAAATTGATAGCAAAGGCGGAATCCAAGGCCAGAAGTTGGGGATGTCGTGCTATTGCATTGCATTGTGATCTGAACAATTCAATAGCCACAATGTTATACCGAGGCCAAGGTTTCAAATGTATCAAGGTGCCAGAAGGAGCAAAGTGGCCTCAGCCAAAGAGCTCGCCAGATATCAGGTTCAACTTCATGATGAAACTTCTCTAA 837 0.4277 MQPKPIPLGISTPLNTTKISPFNITSTKPTSFPSKISPSSNEFSVLSLSLSGFCRASQFVDLFPTVSPEIIVREARLEDYWEVAETHCNTFFPEYSFPLDFMLRIDRLVVAMLAAMLARLARPRGCRRICLVAVTSSSLDETFLFRNGDLKIGGFDGKFSLNKGYVAGILTIDNIADFLPRKGPMRQRRTGIAYISNVAVRENFRRKGIAKKLIAKAESKARSWGCRAIALHCDLNNSIATMLYRGQGFKCIKVPEGAKWPQPKSSPDIRFNFMMKLL. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05124 278 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 70 260 IPR016181 -
Seca10g05124 278 Gene3D - 65 259 - -
Seca10g05124 278 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 129 278 IPR000182 GO:0016747
Seca10g05124 278 Pfam Acetyltransferase (GNAT) family 164 249 IPR000182 GO:0016747
Seca10g05124 278 CDD NAT_SF 185 232 - -
Seca10g05124 278 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 16 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05124 Seca-Chr10 117234453 117241699 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca10g05124 Acetyltransf_1 4.5e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05124 - - gmx:100803930 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05124 10 117234453 117241699 Seca8g07094 8 166982870 166985339 PCT