Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05115 ATGGTTAATGAGGGTGAAGCTGGAGATATAAATAACTTGAAATCCCCTGAAAAAGAAAATGCTTGTTCTGGTGAGGCTGTTCCTGATGTGTACAAAAGGATTTCTGAGTTAACTGATGATGAAATTAGGATGCTTGAGTTTGATTCTGAACTGGAGGCATATAATTTTTATTGTGAATATGTGAAATTCATAGGTTTTGCGGTTAGGAAAGATTATGTATATCGTGATCGTAATAGGTTTATTACTATGAGGCAGTTGGTCTGTAACAGGCAAGGGGAAAGGAGTGAGAAACATTTAAATAGGACGGATAGAGTTAGGGAAGCTAAGGCCATTACTCGGACCAATTGTCTTGCAAGGCTTCGACTGTATTTAGATGGTGATAGTGGTAAGTGGAAGGTTGGAATGTTTGAGTCACAACACAATCATGAGCTTACTCTTGAAAATATGGTTCATTTGATGCCTGCTTATCGTGGTTTGAGTGTTGTTGATAAGGCACAAGTAAATAGTTTTCACTTATATGGTGTTAGGACTTGTCATATAATGGGGCTAATAATGGGTCAGAAAGATGGTTACTCAGATTTGAGATTTTGTAAGAAGGACTTGTACAATCACATTGACAAGGAAAATAGGGCCAAAATAGAGGATGGAGATGCTTTTGCTGCTTTGTGCCATCTTCAAGCTAAGTATGATAGTAATCCAATGACATTTGTTAAGTTCACAACTACTGAAGATGATAGGCTTGAAAACTTGTTCTGGGTTGATGTAGGAAGCAGAATTGATTATGCTTGTTTCGGTGATGTAGTTGCATTTGACACAACATATAAAAAAACAAGTATAACAGGCCTTTGGTAA 852 0.3709 MVNEGEAGDINNLKSPEKENACSGEAVPDVYKRISELTDDEIRMLEFDSELEAYNFYCEYVKFIGFAVRKDYVYRDRNRFITMRQLVCNRQGERSEKHLNRTDRVREAKAITRTNCLARLRLYLDGDSGKWKVGMFESQHNHELTLENMVHLMPAYRGLSVVDKAQVNSFHLYGVRTCHIMGLIMGQKDGYSDLRFCKKDLYNHIDKENRAKIEDGDAFAALCHLQAKYDSNPMTFVKFTTTEDDRLENLFWVDVGSRIDYACFGDVVAFDTTYKKTSITGLW. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05115 283 MobiDBLite consensus disorder prediction 1 21 - -
Seca10g05115 283 Pfam FAR1 DNA-binding domain 55 145 IPR004330 -
Seca10g05115 283 PANTHER OS01G0519700 PROTEIN 45 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05115 Seca-Chr10 117081791 117082642 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g05115 FAR1 9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05115 - - ccaj:109792835 274.633